Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele06g2629 | ATGGAAGCTACAGAAGAAGTCGTCATCTCTAAAGACCAAACACAGATAGTCAAAGGCAAAAGAACCAAAAGGGTAAGGCCACAATCTCCATCGCCCCTCGCCAAAGCCGAAGAAGATCAATTTCTAGGTAAAGATGATAATAATGCCAAGAACAACTCCGCCGCCACCACCACAACAACAACTTCTTCTACAGAATTTGAAGATCACAATAACAACAACAGTAGCAGCACAGAGGAAGAGGAGGACATGGCCAATTGCTTGATCCTTCTGGCTCAAGGACAATCTCGGGATTCTCCGGAACTCGCCTCCGAGGAAGACGGTAACATGATGATGATGATGAAGCCTAACAACAACAACAATTGCAATTATAACAACAGCAGTAGGAAATTCATGGAAGCATCCACCATTGGAGGAGCCAACAGAGCAGGTTTTTATGTCTATGAATGCAAGACTTGTAATAGAACCTTCCCTTCTTTTCAAGCACTTGGAGGTCACAGAGCAAGCCACAAGAAGCCTAAGACCTTATCGTCGCCTCCATTGGCCACCTCCAATATATACAAAGAGAAGAAGAAAGAGCAAGACTTCATTCTACATAAGAACAATAATCACAGCACACTTTCTTTTCAACTTTTAAATATTAATGTCAATGGTAATAACAATAAGGTTCATGAGTGTTCAATTTGTGGGGCTGAGTTTGCTTCGGGTCAGGCTTTAGGTGGCCACATGAGAAGGCACAGAGCACCCATTGGAACAACGACGACTACGAACATTGGGATGACGACGTCGTTGGCGCTTAACAACAACAATCCAGTGGGTTTGGGTTTGGAAGCAGATCATCAATACAACAATGAAGATCATCATCATCAACCCAGAAAGAAAAGGAACGTTTTGACTTTGGATTTAGATCTTAATCTTCCTGCCCCAGAAGATGATGATCATCATCAGAGCAATTCATCATCTTTTGCGTTTGAACACAAGAAGCAGAAGCAGCAACAACAAGAAGCAAGCCTGGTTTTTTCTTCTGCACCTGCTTTGGTGGATTGTCATTACTGA | 1053 | 0.4274 | MEATEEVVISKDQTQIVKGKRTKRVRPQSPSPLAKAEEDQFLGKDDNNAKNNSAATTTTTTSSTEFEDHNNNNSSSTEEEEDMANCLILLAQGQSRDSPELASEEDGNMMMMMKPNNNNNCNYNNSSRKFMEASTIGGANRAGFYVYECKTCNRTFPSFQALGGHRASHKKPKTLSSPPLATSNIYKEKKKEQDFILHKNNNHSTLSFQLLNINVNGNNNKVHECSICGAEFASGQALGGHMRRHRAPIGTTTTTNIGMTTSLALNNNNPVGLGLEADHQYNNEDHHHQPRKKRNVLTLDLDLNLPAPEDDDHHQSNSSSFAFEHKKQKQQQQEASLVFSSAPALVDCHY | 350 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele06g2629 | 350 | MobiDBLite | consensus disorder prediction | 306 | 320 | - | - | |
| Lele06g2629 | 350 | SMART | c2h2final6 | 223 | 245 | IPR013087 | - | |
| Lele06g2629 | 350 | SMART | c2h2final6 | 147 | 169 | IPR013087 | - | |
| Lele06g2629 | 350 | MobiDBLite | consensus disorder prediction | 1 | 82 | - | - | |
| Lele06g2629 | 350 | MobiDBLite | consensus disorder prediction | 46 | 81 | - | - | |
| Lele06g2629 | 350 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 147 | 174 | IPR013087 | - | |
| Lele06g2629 | 350 | Pfam | C2H2-type zinc finger | 222 | 248 | - | - | |
| Lele06g2629 | 350 | Pfam | C2H2-type zinc finger | 146 | 172 | - | - | |
| Lele06g2629 | 350 | SUPERFAMILY | beta-beta-alpha zinc fingers | 146 | 245 | IPR036236 | - | |
| Lele06g2629 | 350 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 223 | 245 | IPR013087 | - | |
| Lele06g2629 | 350 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 67 | 330 | - | - | |
| Lele06g2629 | 350 | MobiDBLite | consensus disorder prediction | 304 | 335 | - | - | |
| Lele06g2629 | 350 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 225 | 245 | IPR013087 | - | |
| Lele06g2629 | 350 | MobiDBLite | consensus disorder prediction | 321 | 335 | - | - | |
| Lele06g2629 | 350 | Gene3D | Classic Zinc Finger | 145 | 245 | - | - | |
| Lele06g2629 | 350 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 149 | 169 | IPR013087 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele06g2629 | Lele-ChrLele06 | 34181853 | 34182905 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele06g2629 | 1 | 350 | C2H2 Transcription Factor Family | AT5G04390 | 41.860 | 8.26e-81 | 249 |
Transcription factors information