Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2626 ATGCTTCCTCCTATTACCGGCATTCTCTTCCTATGTATCTTCTTGAGTTCTTTCTCTTCTGCCGTTAAAGCTTCCTTCAACCTCTCCTTGCCCCACCAGCATCCTTACCCTGAAGCTGTGGTTCTTGAAGTTCACAGGAGAGTCAATGTATCTCTTTCCCGGAGGGTACTACTCGCCGGCTCCGTAAAGGACCTCGGTAATGGCTGTCCCACCGGAAATCCAGTTGACGACTGCTGGAGATGCGACCCTAACTGGGCTGCAAACCGGCAGAAGCTCGCTGACTGCGGCATTGGGTTCGGCCGTGACGCCATGGGTGGAAAAGGCGGCCAGATCTACGTCGTCACAGACTCATCCGACTCCGACCCAGCGAACCCAACTCCGGGATTGGTTCAGAGAATGCCGAGATGTAGATTGGGGTATATACATGTTGTGAACAACGATTTCACTCAGTGGGAGATGTATGCGATCGGCGGCAGTGCCAACCCCACCATCAACAGCCAGGGTAACCGTTATACGGCGCCGCTCAGTCCTGATGCTAAAGAGGTGACGAAGCGCGTGGACACAGACGAGAGGGAGTGGGCGGATTGGAACTGGAGGACGGAGGGTGACGTCATGGTCAACGGCGCATTCTTCGTGCCGTCCGGCGGTGGCTTCAGCGCTCAGTACGCCAGAGCCTCCAGCGTCGACCCCAAGTCTGCCGTCCAGATTGACCAGCTCACCGGCAATGCCGGCGTCTTCGGAGATCCCAGGGATAATGGAGATCTGTTCCCCGGGTTCAGCGGCGGTGGGACCGTCACGGGCGCCACCAGCACCGGCAACGTGGGGTCCAGCGGCGGCGACGATGGGGACTTCTTTGGAATGATATTCAAGGGAAGTGGTATCAGCGAAGCAGCGCCACCCTCACTTTCCATTGTTTCAATCTTCTTGTCTCTCCTCATTATTTTCATTTTGTACACTTTCACCAACCTTGCCCTCATACTATGA 984 0.5579 MLPPITGILFLCIFLSSFSSAVKASFNLSLPHQHPYPEAVVLEVHRRVNVSLSRRVLLAGSVKDLGNGCPTGNPVDDCWRCDPNWAANRQKLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPANPTPGLVQRMPRCRLGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYTAPLSPDAKEVTKRVDTDEREWADWNWRTEGDVMVNGAFFVPSGGGFSAQYARASSVDPKSAVQIDQLTGNAGVFGDPRDNGDLFPGFSGGGTVTGATSTGNVGSSGGDDGDFFGMIFKGSGISEAAPPSLSIVSIFLSLLIIFILYTFTNLALIL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2626 327 Gene3D - 72 127 IPR012334 -
Lele06g2626 327 Gene3D - 128 247 IPR012334 -
Lele06g2626 327 PANTHER PECTATE LYASE 18-RELATED 34 128 IPR045032 GO:0030570
Lele06g2626 327 SUPERFAMILY Pectin lyase-like 128 246 IPR011050 -
Lele06g2626 327 SUPERFAMILY Pectin lyase-like 73 129 IPR011050 -
Lele06g2626 327 SMART amb_all 5 177 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2626 Lele-ChrLele06 34133697 34138260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2626 128 252 Polysaccharide Lyase AT3G54920 76.190 9.63e-63 205