Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2605 ATGCTACGGTTAAGTTTAGATGGGTTCGCCGTTGTGAGCCTTGGAATAACCCTTCGTTCTCTCCCCTTGGGACGCTGTGTCAAGGTTCTTTCTGTTTCCATGGAGTTTGAAGTGAAATTAGTAGGGAGCATAGACAACTGCTTCGTATCCCTTCCTCTTCCTCTTATCCAACTTCTGCATTCAACACGCTCGACGCCACTGCCTCCTGTTCTCGCTCTCGAGCTTCGCTCCCGCGCTGACGATCTCTGGGTGGTTGCTTGGTCCGGGGCCACTTCTTCTTCTAATGACATAGAGGTTGCACAACATTTTGCAGAATGCATTTCCTTGCCAGATCATGCTAGAGTTCAAGTAAAAGCTGCTTCTAACGTGTCACATGCTTCTCTAATTACAATAGAACCCCACACAGAAGATGACTGGGAAATTTTGGAGCTGAACTCCGAGCAAGCTGAGGCAGCAATTTTAAACCAGATCAGGATTGTCTATGAAGGAATGCGATTTCCTTTGTGGTTGCATGGTCACACAATGATCACATTCTTTGTTTCTTCTGTTATTCCCAAGAAAGCGGTGGTGCAACTCATGCCAGGAACTGAAGTTGCAGTTGCCCCAAAAAGACGTAAAAGATCTTCAAATTCACTTGCAGACTTTCATCAAGACTTCTACAGTAGAGAATACACTACAAAGATGCTTCTCCGTATACAGGATCCAGACAGGTTGTGTCACACAAGTGCTTGTGTCAAAGGACAACATCTTCATATGGAACTCACTTCTGCTGCTTTTGTTCACCCAGAAACAAGCAAACAGTTCTCACTCAATAGGCTTCAATTGGTCTCCATAGTTCCAAGAATATCCAAGAAGAAGGCTAATGGTACTTCCAGATCGAATATTTTGAAAACAAAAGGCAGTGTAACTAGGGAAGTTGACTCTGGAAATTTAACTGATGAGAACGGGTGTCCACAAGCAATTGTTTATCTTCTGCTTTCAGAGTCAGTGGCTAAAGGACATGTCATGGTTGCTAAATCTCTTCGTCAGTATTTAAGAGCTGGTCTGCATTCATGGGTCTATTTGAAGGCATGTGAAGTTAATTTGGAAAAAGCTATTCCCTCCTTCTCTCTTTCTCCTTGCCACTTCAGAATGGTAAGGCAGGATGATGATGGTGATAATCATATAGATAAGAACAAGCTGACTAGGACTACTTCAGTTGTCTTTGGGGATCTTGTGGATTGGTCTGTCCATAATGAAGTTATTAATGTTTTTTCGGATGAATCCCATTCTGAAGCAGATGAAGAGGTTGCAAATGAGTCTGAGAATCAAAATGGACTACAGCATCTTCTAAGAGTATGGTATATTGCACAACTTGATGCAGTTGCTTCCTTTACTGGTTTGGAGGTTAATGCACTGGTATTGGGAAGTAAAACCTTACTTCATTTTGAAGTGAGTTACATAAAGCTTGGGACTAATCGGAAGGTTCAGCTAGCTTCTAATTCATCAGAAAACAGAAATAAGACAGCTGAAGTATTGTTTTTATTGACCATTAGTGAAGATTCTGTGCATCATGGAAAAAATACTGCATATGAAATTGCACTTAGTGAAAGAAACAGTAATCCAGCACATCAACAGCTGTTGAAAAGTCTGAAGTTCACTGATCCTGTCTCTATCCAATCTCTAGAAGATACAATACGTGAAGAACATATTACTTCAGAAGTAACTAGCCTGGACTGGATGGAGGCAACTGTTTCTGATGTTGTCAATAGGTTGACCGTATTGTTATCTTCTGCTTCTGGTATGTGGTTTGATTCACATGACTTACCACTCCCAGGACACGTTCTTATATATGGACCTTCAGGCTCTGGCAAAACTTTACTGGCAAGAACTGTTGCTAAATACTTTGAGAAACATGAAGACATCTTAGCACACATAATTTTTGTTTCTTGTTCAAAACTAGCTTTGGAGAATGTCCCAATAATCCGGAAAGAAGTTAATAAAAACATTATGGAAGCTTTAGATCATGCACCTTCAATTGTCATCTTTGATGATCTTGATAGCATAATTTTCACCTCTGACTCGGAAGGGCCTCAACCCTCAATGTCTGCTGCTGGACTCACAAGCTTTCTGGTTGACATTATTGATGAATATGGGGAGAGAAGGCAAAAATCATGCGGATTTGGACCAATAGCCTTCATAGCTTCTGTACAAGCTCTCGAGAAGATACCACAGTCTTTAAGCTCGTCAGGGAGGTTTGACTTTCACATACAGCTGCCAAATCCTGCAGCTTCAGAGCGGGGGGCTATGTTGAGGCATGAAATAAAAAGGCGTCACTTGCAATGTGCTGATGACATCCTGCTTGATGTAGCTGCCAAATGTGATGGCTATGATGGTCATGATCTGGAAATATTGGTTGATAGAGCTGTCCATGCTGCTGTTTCCCGCTTTCTCCCATCAAATGTTGCTCTTAGTGAGAATGAGAGTCCTGCTTTACTTATGCAAGATTTCTCTCAGGCAATGCATGATTTTCTTCCAGTTGCAATGCGAGACATTACAAAAGCTGCTTCTGATGGTGGACGCTCTGGATGGGATGATGTTGGAGGTCTTGTTGACATTCAAAACACTATTAAGGAGATGATAGAGTTGCCTTCTAAGTTTCCAAAAACTTTTGCCCAAGCTCCTTTGAGGTTAAGATCGAATGTCCTTTTATATGGGCCTCCTGGTTGTGGCAAAACTCACATAGTTGGTGCCGCTGCTGCTGCTTGTTCTCTACGTTTCATATCTGTGAAAGGGCCAGAACTATTGAACAAATACATTGGTGCTTCTGAACAAGCTGTTAGGGATATATTCTCTAAAGCAGCTGCAGCAGCACCATGTCTACTCTTTTTTGATGAGTTTGATTCTATTGCCCCCAAGAGAGGACATGACAATACCGGAGTCACTGATCGTGTTGTGAATCAGTTTCTGACTGAGTTAGATGGCGTTGAGATTTTAACAGGTGTATTTGTTTTTGCTGCTACCAGTAGACCAGACTTGCTTGATGCAGCACTTTTGAGACCAGGCAGGTTAGATCGGCTGCTATTCTGCGACTTTCCATCTCAGCAGGAAAGGTTTGAAATTCTTACGGTACTTTCTAGAAAGTTACCTCTGGCCAGTGATGTAGATTTGGCTGCAGTAGCTCATATGACTGAGGGATTTAGTGGAGCTGATCTCCAAGCTCTCCTTTCAGACGCTCAACTTGCCGCAGTTCATGAAGTCTTGGACGATGTAAAAGCTTCTGAGCCTGAGAAAAAACCAGTTATTACATACACCCTTCTCAAGGCCACAGCCTCCAGGGCTAGACCATCTGTTTCAGATGATGAGAAAAGAAGACTTTACAGTATTTACAGCCAGTTCCTAGCTTCAAAGAGATCTGTTGCTGCTCAGTCAAGAGATGCAAAAGGCAAGAGGGCAACTCTAGCGTGA 3447 0.4236 MLRLSLDGFAVVSLGITLRSLPLGRCVKVLSVSMEFEVKLVGSIDNCFVSLPLPLIQLLHSTRSTPLPPVLALELRSRADDLWVVAWSGATSSSNDIEVAQHFAECISLPDHARVQVKAASNVSHASLITIEPHTEDDWEILELNSEQAEAAILNQIRIVYEGMRFPLWLHGHTMITFFVSSVIPKKAVVQLMPGTEVAVAPKRRKRSSNSLADFHQDFYSREYTTKMLLRIQDPDRLCHTSACVKGQHLHMELTSAAFVHPETSKQFSLNRLQLVSIVPRISKKKANGTSRSNILKTKGSVTREVDSGNLTDENGCPQAIVYLLLSESVAKGHVMVAKSLRQYLRAGLHSWVYLKACEVNLEKAIPSFSLSPCHFRMVRQDDDGDNHIDKNKLTRTTSVVFGDLVDWSVHNEVINVFSDESHSEADEEVANESENQNGLQHLLRVWYIAQLDAVASFTGLEVNALVLGSKTLLHFEVSYIKLGTNRKVQLASNSSENRNKTAEVLFLLTISEDSVHHGKNTAYEIALSERNSNPAHQQLLKSLKFTDPVSIQSLEDTIREEHITSEVTSLDWMEATVSDVVNRLTVLLSSASGMWFDSHDLPLPGHVLIYGPSGSGKTLLARTVAKYFEKHEDILAHIIFVSCSKLALENVPIIRKEVNKNIMEALDHAPSIVIFDDLDSIIFTSDSEGPQPSMSAAGLTSFLVDIIDEYGERRQKSCGFGPIAFIASVQALEKIPQSLSSSGRFDFHIQLPNPAASERGAMLRHEIKRRHLQCADDILLDVAAKCDGYDGHDLEILVDRAVHAAVSRFLPSNVALSENESPALLMQDFSQAMHDFLPVAMRDITKAASDGGRSGWDDVGGLVDIQNTIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSQQERFEILTVLSRKLPLASDVDLAAVAHMTEGFSGADLQALLSDAQLAAVHEVLDDVKASEPEKKPVITYTLLKATASRARPSVSDDEKRRLYSIYSQFLASKRSVAAQSRDAKGKRATLA 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2605 1148 CDD AAA 887 1024 - -
Lele06g2605 1148 FunFam Peroxisome biogenesis protein 1 561 755 - -
Lele06g2605 1148 Pfam ATPase family associated with various cellular activities (AAA) 608 753 IPR003959 GO:0005524|GO:0016887
Lele06g2605 1148 Pfam ATPase family associated with various cellular activities (AAA) 895 1022 IPR003959 GO:0005524|GO:0016887
Lele06g2605 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 588 835 IPR027417 -
Lele06g2605 1148 CDD AAA 601 753 - -
Lele06g2605 1148 Pfam AAA+ lid domain 1047 1087 IPR041569 -
Lele06g2605 1148 Gene3D - 123 203 - -
Lele06g2605 1148 Gene3D - 555 755 IPR027417 -
Lele06g2605 1148 FunFam Peroxisome biogenesis factor 1 124 203 - -
Lele06g2605 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 857 1118 IPR027417 -
Lele06g2605 1148 FunFam PeRoXisome assembly factor 1026 1103 - -
Lele06g2605 1148 PANTHER AAA-FAMILY ATPASE 252 1123 - -
Lele06g2605 1148 SUPERFAMILY ADC-like 43 119 IPR009010 -
Lele06g2605 1148 Gene3D - 1026 1105 - -
Lele06g2605 1148 Gene3D - 856 1117 IPR027417 -
Lele06g2605 1148 SMART AAA_5 604 756 IPR003593 -
Lele06g2605 1148 SMART AAA_5 891 1027 IPR003593 -
Lele06g2605 1148 FunFam Nuclear valosin-containing protein-like 853 1032 - -
Lele06g2605 1148 Pfam Peroxisome biogenesis factor 1, N-terminal 129 202 IPR015342 GO:0005524|GO:0005777|GO:0007031
Lele06g2605 1148 Gene3D - 756 835 - -
Lele06g2605 1148 ProSitePatterns AAA-protein family signature. 995 1013 IPR003960 GO:0005524|GO:0016887
Lele06g2605 1148 SUPERFAMILY Cdc48 domain 2-like 125 202 IPR029067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2605 Lele-ChrLele06 33931782 33947445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2605 608 819 Calmodulin-binding Proteins AT3G56690 27.064 2.85e-08 56.2