Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2595 ATGGGTAATGTTGAAATTCCCAATTGGCTAAAAGGCTTGCCATTGGCTCCGGAATTTCGCCCAACTGATACTGAATTCGCCGACCCGATTGCTTACATTTCAAAGATTGAGAAAGAAGCTAGCGCCTTTGGGATATGTAAGATTATTCCTCCATTACCCAAGCCTTCTAAAAGATACGTCTTCTCTAATTTAAACAAATCTCTTTTGAAGAGCCCGGAATTGGCTTCAGATAGTAATTCAGTTGGAGTTAGTAATTCTTCGAAAATTGTTTCTGGGGATAGTGGTAGTGATGGGGAGGCACGGGCTGTGTTTACCACAAGGCATCAAGAACTGGGGCAGAGTATTAAAAGAGCCAAAGGAACAATTCAAAGCCCACTTGTAGGTGTTCACAAGCAAGTATGGCAGAGTGGGGAAATTTATACACTCGAACAGTTTGAGTCTAAATCAAAGGCCTTTGCAAGAAGTGTACTAGGTATGGTTAAGGAGGTTTCTCCCCTGGTTATAGAGGCTATGTTTTGGAAGGCAGCTTCAGAGAAGCCTATATATGTGGAGTATGCCAATGACATGCCTGGGTCTGCTTTTGGAGAATCCAAGGGTCAGTTTCATTACATTCACAGAAGGAGAAGGAAAAAGGCTTATTATCAAAGGGGTCTAGATACCTCAGATTGCCAAGAACTCAAAATGGATAAAATAAGAGATACCAAGATGGTCGAAAGTAAGGATGCTTCTGCCCATAATCATGCAGACACTTGCTCACAGACATCAAATTCAACTTCAAGCCCGTCCACATTTTCATCAAATGAAGCCCCACATTCTAGTAGGCAGAAGAGTTCAGATTCCAGCAGTGAGATGGAAGGTACTGCTGGTTGGAAGCTTTCAAACAGTCCTTGGAACTTGCAAGTTATTGCACGATCACAGGGCTCGCTAACTCGTTTCATGCCAGATGATATTCCTGGTGTTACTTCCCCCATGGTATACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCATGTAGAGGATCATGAACTTCATAGCATGAATTTTCTTCACATTGGCTCGTCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCAGATGCTTTCGAGGAACTCATCCGCACTGAGGCTTATGGTGGTGATATGGATCACTTAGCTGCTTTGACTCTGCTGGGGGAGAAGACAACCCTTATATCACCGGAGGCAGTTGTTGCATCTGGGATCCCTTGTTGCAGGTTGACGCAGAACCCTGGAGAATTTGTTGTGACCTTCCCAAGGGCTTATCATGTAGGATTCAGCCATGGTAATTGCTTTGAAACTTTTGTACGTTCAAAGGATGTTGCATTTATGCATGGTTTTAACTGCGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTCACAGTGGCCAAGGAAGCTGCAGTGCGTAGGGCTGCAATGAATTATCTTCCCATGCTTTCCCATCAGCAACTGCTTTACTTGTTGACTATGTCTTTTGTTTCAAGAACATTATTACCAGGTGTGCGGAGTTCCCGTCTGAGAGACCGTCAAAAAGAAGAAAGAGAATTGCTAGTAAAAAGATCTTTTATAGAAGATATGCTGCAAGAAAACAATCTTCTATCCTTTCTTCTTGGAAAGCAATCAACTTATCATGCTGTTTTATGGAATGCTGATTTACTCCCAGATCTGAGCAAGGATTCTCCTCAGTTGCCTGACTTAACTTCTACAACTAGAACCTCTATGGCAGACAGTGTGTCAAATTCGAGTTCTGCAGATAGGAGCAACCACAGTTGTTTGCTTGATGAAATGAGCTTGTATATGGAAAATCTGACTGAACTTTATCTTGGTGACGACAGTCTTCCATGTCACTTCCAAACTGATTCAGGAGCATTGGCTTGTGTGGGTTGTGGGATTCTTGGTTTTCCATTCATGACTGTGGTACAGCCATCAGAGAGATCAGCGATGGAACTTTTGCCAGTCTCAGGGAATGCTCTCTCTGTTACTGATCCGCCTTCAACAAATGAACCATCAAAACTATCATTAATGAACCATGACAAGGGTTGGAACAACTCTTGCAAATTTTTGAGGCCACGAATTTTCTGCCTGGAGCATGCTGTTCAGATTATGGAGATACTGCAGTGCAAAGGTGGAGCTAGTGTGCTTGTAATTTGCCATTCAGACTATCAGAAAATCAAGGCACATGCCAGGGCAGTGGCAGAGGAGATAGGCTGTGCTTTTGATTATAAGGAGGTTCCGTTAGATATGGCATCCCCTGAAGATTTGACCTTGATAGATCTTGCGATTGATGGTGAAGAACCCAATGAATGTGAAGAAGACTGGACATCTAAATTAGGAATTAACCTGCGGCATTGTGTCAGTGCAAGAAAGAACTCTCCATATAAACAACCTCCTTTCAAATTGGCTCTGGGAATGTTGTTCCCTGAGAAATTTCCTGGTTCAGATGTCTTATCTATAAATTGGCAGTCAAAGAGATTTCGGTCAAGAAGGTTGAAGTATTTAGCTCAGGCGAAGGCATGTGATGGGATTCAGAGAAAGATGGGTGATCAGTTGGAACGAAAGACAGATGGTTCCTCTGCAAAAAAGATGCTTCAGTATTCAAGGAGAAAGTTCAGGTCCAAGCAAGGTTGTCTCTCTGGATCCAACATGGTTAATGTACCCCATAAAGAGTCCATAAATGTGCCAGCTGTCTTGAGTAGAGATTCTGGTAACCATGTCTCTCAAAATGAGCCTGGTACTGAGAATTCTAGGAATGATTGTGCCCTGTCATGTGTCTTGCAACCTGAAAATCTACTTACTGAAATGACCACTAGTCTGAGTTTGAAAGTTGCTTCTTCACAACCTTCAGATTTCACTCTGGAACCTACGTCAGCGGATGAAAATTTGGGACCAGAGGTCCAGAATCAAACTACAGAGGAATTAAAGATAGATGGCAAAAGTAGCTGGACAACGCCTGATCATTCAATGATGTCTTGTAAGATGGGTGCCTCAGAAATTGAGGATAAGGACGATGAGATTTTGCATGACAAGATAAATTCTAGCTCACTTATCGTTGCTGAAGACAAAAATATTGACATGCTTATCACAGAAGAAATTAACACCAATTATAGCAATAGTGTGGATTTTAATGAAGTACATCAAGAATTTGAGCCTGCCCACAAGAGTAACAGGGCGGAAGCTACTTCATCTCCTGTTTCATTGGTAACTCAGCAGACACTTTCCTTCATGGAAGAAAATTCTAATACTGCGAGAAAGAATCATAGCACTGAAAGCATGATCTATGATGCACCCTTAAAAGAGACAACGGACACTTCTAGTTTGAATGAAAACAACATGGAACTTACTGTAAGTTGTGATAACTCAATAAATGAGCAGACGTCAAAGATTGATGCTCATGAAGTTCCAAAAGAGCTTTGTGCCCTTGCAGACTCCAGCCCTCAATCTACTTCAGATGTGAGAAAAGAATCAGAAATCCAGCGAAGAATCATGAATGATGAGGAAATCTGCTCTGGTACTGGCGCTGGGCCATCATTAAACGACTCTTCTGTGTCAATGCGGGAGTGTTCTGCAACTGAGGGAGAGAAATGTGCTAGAGATAGCTTGAATGGAAGCGAAATTCATTTTTCACAAGACTATAGGGAGATGCCAATCTCTGAAAGTTTGCCAGGCCTTAGGTCAAATACCCGGAAGAGAAGAAACACGGAATTGGAACGGATACAAGATATGGATATAAGTTTCCATGGCTTTGTTAGAAGTCCATGTGAAGGGTTGAGACCGAGGGCTTGTAAAGTAGCATCTGACAGAAGCTTGGCTGAAACCAGCAATTCTGTGGAGGAAAATCTGGAGGTTAAAAGGGCTAGGAGGAAATCATCAGATGTCATGTTGTCTGGCAAGAATAAGAAGGATGCTGTCAAGAGGTCTCACAAGTGTGACCTTGATGGTTGCCACATGAGTTTTATGTCCAAAGCAGAGTTAATGTTGCACAAGCGCAACCGCTGCCCTCTTGATGGGTGTGGAAAGAAGTTCAGATCCCACAAATATGCTGTGCTTCACCAACGTGTCCATGATAATGACAGGCCACTCAAGTGCCCATGGGAAGGTTGCTCAATGTCATTCAAGTGGGCATGGGCCAGGACCGAGCATATACGGGTGCATACTGGGGAAAAGCCATACCACTGCAAGGTTGAGGGATGTGGCCTTTCGTTTAGATTTCTAGTCTCAGGATATCATGAATCTGATATCTTCTGGTTAGGTGTAAAGTTAGGGATAGAATGGTTGTTATCTCGAGATTTAGCAGCAGCATCAAACTCTCCAGAAGAGGAGAAATCATGTTGTTGGTTGGTCATATTCTTGATGGCCACATCTGTGAAGTTGCCTGGACTTAAAGATCTTTTGGTGCTTTGGATAGTTCATTGTGCATGCAGAGTACTTGAGATTGAGTTCATTTGTCCTTTAGGATGA 4476 0.4276 MGNVEIPNWLKGLPLAPEFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKRYVFSNLNKSLLKSPELASDSNSVGVSNSSKIVSGDSGSDGEARAVFTTRHQELGQSIKRAKGTIQSPLVGVHKQVWQSGEIYTLEQFESKSKAFARSVLGMVKEVSPLVIEAMFWKAASEKPIYVEYANDMPGSAFGESKGQFHYIHRRRRKKAYYQRGLDTSDCQELKMDKIRDTKMVESKDASAHNHADTCSQTSNSTSSPSTFSSNEAPHSSRQKSSDSSSEMEGTAGWKLSNSPWNLQVIARSQGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNFLHIGSSKTWYAVPGDYADAFEELIRTEAYGGDMDHLAALTLLGEKTTLISPEAVVASGIPCCRLTQNPGEFVVTFPRAYHVGFSHGNCFETFVRSKDVAFMHGFNCGEAANFGTPQWLTVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRTLLPGVRSSRLRDRQKEERELLVKRSFIEDMLQENNLLSFLLGKQSTYHAVLWNADLLPDLSKDSPQLPDLTSTTRTSMADSVSNSSSADRSNHSCLLDEMSLYMENLTELYLGDDSLPCHFQTDSGALACVGCGILGFPFMTVVQPSERSAMELLPVSGNALSVTDPPSTNEPSKLSLMNHDKGWNNSCKFLRPRIFCLEHAVQIMEILQCKGGASVLVICHSDYQKIKAHARAVAEEIGCAFDYKEVPLDMASPEDLTLIDLAIDGEEPNECEEDWTSKLGINLRHCVSARKNSPYKQPPFKLALGMLFPEKFPGSDVLSINWQSKRFRSRRLKYLAQAKACDGIQRKMGDQLERKTDGSSAKKMLQYSRRKFRSKQGCLSGSNMVNVPHKESINVPAVLSRDSGNHVSQNEPGTENSRNDCALSCVLQPENLLTEMTTSLSLKVASSQPSDFTLEPTSADENLGPEVQNQTTEELKIDGKSSWTTPDHSMMSCKMGASEIEDKDDEILHDKINSSSLIVAEDKNIDMLITEEINTNYSNSVDFNEVHQEFEPAHKSNRAEATSSPVSLVTQQTLSFMEENSNTARKNHSTESMIYDAPLKETTDTSSLNENNMELTVSCDNSINEQTSKIDAHEVPKELCALADSSPQSTSDVRKESEIQRRIMNDEEICSGTGAGPSLNDSSVSMRECSATEGEKCARDSLNGSEIHFSQDYREMPISESLPGLRSNTRKRRNTELERIQDMDISFHGFVRSPCEGLRPRACKVASDRSLAETSNSVEENLEVKRARRKSSDVMLSGKNKKDAVKRSHKCDLDGCHMSFMSKAELMLHKRNRCPLDGCGKKFRSHKYAVLHQRVHDNDRPLKCPWEGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFLVSGYHESDIFWLGVKLGIEWLLSRDLAAASNSPEEEKSCCWLVIFLMATSVKLPGLKDLLVLWIVHCACRVLEIEFICPLG 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2595 1491 Pfam jmjN domain 17 50 IPR003349 -
Lele06g2595 1491 SUPERFAMILY Clavaminate synthase-like 292 473 - -
Lele06g2595 1491 Gene3D Cupin 9 481 - -
Lele06g2595 1491 SMART JmjN_1 15 55 IPR003349 -
Lele06g2595 1491 ProSitePatterns Zinc finger C2H2 type domain signature. 1368 1390 IPR013087 -
Lele06g2595 1491 FunFam Probable lysine-specific demethylase ELF6 1363 1392 - -
Lele06g2595 1491 Pfam JmjC domain, hydroxylase 324 439 IPR003347 -
Lele06g2595 1491 SMART c2h2final6 1366 1390 IPR013087 -
Lele06g2595 1491 SMART c2h2final6 1336 1360 IPR013087 -
Lele06g2595 1491 SMART c2h2final6 1313 1335 IPR013087 -
Lele06g2595 1491 MobiDBLite consensus disorder prediction 237 291 - -
Lele06g2595 1491 SMART cupin_9 291 477 IPR003347 -
Lele06g2595 1491 MobiDBLite consensus disorder prediction 567 594 - -
Lele06g2595 1491 ProSiteProfiles Zinc finger C2H2 type domain profile. 1336 1365 IPR013087 -
Lele06g2595 1491 MobiDBLite consensus disorder prediction 246 291 - -
Lele06g2595 1491 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Lele06g2595 1491 Gene3D Classic Zinc Finger 1334 1412 - -
Lele06g2595 1491 ProSiteProfiles Zinc finger C2H2 type domain profile. 1366 1395 IPR013087 -
Lele06g2595 1491 MobiDBLite consensus disorder prediction 565 594 - -
Lele06g2595 1491 ProSitePatterns Zinc finger C2H2 type domain signature. 1338 1360 IPR013087 -
Lele06g2595 1491 ProSiteProfiles JmjC domain profile. 291 477 IPR003347 -
Lele06g2595 1491 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1361 - -
Lele06g2595 1491 SUPERFAMILY beta-beta-alpha zinc fingers 1354 1394 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2595 Lele-ChrLele06 33787406 33795217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2595 1 875 C2H2 Transcription Factor Family AT5G04240 56.839 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele06g2595 JmjC 1e-33 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2595 06 33787406 33795217 Lele07g2631 07 31800425 31807986 hybridization
Lele06g2595 06 33787406 33795217 Lele08g2534 08 31064667 31072403 hybridization