Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2587 ATGCGGACTATTTCCTTGGGAATATCACTATCCCCAACTCCTGTCAACAATTCCAAATCCTTATCTTCCCTTAATTTCTCTAATTTCAGAAAACCAGGATCTTTCCCGTCAAGGGTTTCTCTTTCCTCCTCTGCTAATGGATTCTCTTTCCTTTCCCTCTGCCAATCAGGACTTTGCAGAGCTAGTCAAGTTGTTGATCTATTCCCAACTATGTCTCCGGAAATCATCGTTCGAGAGGCCAGGTTAGAAGACTGTTGGGAAGTAGCAGAGACTCATTGCAGCTCCTTCTTCCCTGAATATTCATTCCCATTGGACTTTGTTCTGAGAGTGGACAGACTGGTAGCAATGTTAGCAGGATTCTCTTTACCAAATGGTTGCAAAAGAACATGTTTGGTTGCTGTTATTGGCAGCTCACTTATTGAAACTCTCTTCATTCGGAGTGAAGATTTCAAGATCGGTGGTCTTGATGGGAGAGTCAGCATCAACAAGGGATATGTGGCCGGTATATTAACGGTAGATACTGTCGCGGACTTTCTCCCTCGAAAAGGACCACTGAGACAGAGAAGGACTGGAATTGCATACATATCCAATGTGGCAGTTCGGGAAAAATTCAGACGCAAGGGTATTGCTAAAAAACTAGTAGAAAAAGCAGAATCTCAGGCCAGAACTTGGGGATGTCGCTCAATCTCATTGCACTGTGATTTGAACAATACTGTAGCCACAAAGCTATACCAAGGCCAAGGCTTCAGATGTATAAAGGTGCCCGAAGGCGCAAACTGGCCCCGGCCAATGACCTCACCAGATGTTAAGTTCACTTTCATGATGAAGCTTCTCAGTACTTCAACTGCTTCTTAG 855 0.4421 MRTISLGISLSPTPVNNSKSLSSLNFSNFRKPGSFPSRVSLSSSANGFSFLSLCQSGLCRASQVVDLFPTMSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRVDRLVAMLAGFSLPNGCKRTCLVAVIGSSLIETLFIRSEDFKIGGLDGRVSINKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKKLVEKAESQARTWGCRSISLHCDLNNTVATKLYQGQGFRCIKVPEGANWPRPMTSPDVKFTFMMKLLSTSTAS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2587 284 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 75 269 IPR000182 GO:0016747
Lele06g2587 284 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 75 276 - -
Lele06g2587 284 Pfam Acetyltransferase (GNAT) family 166 249 IPR000182 GO:0016747
Lele06g2587 284 Gene3D - 69 259 - -
Lele06g2587 284 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 282 - -
Lele06g2587 284 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 74 257 IPR016181 -
Lele06g2587 284 CDD NAT_SF 191 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2587 Lele-ChrLele06 33674428 33678693 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele06g2587 Acetyltransf_1 4.1e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2587 06 33674428 33678693 Lele07g2623 07 31678314 31680791 hybridization
Lele06g2587 06 33674428 33678693 Lele08g2524 08 30952402 30955628 hybridization