Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2583 ATGCAAAGAAGACAGAAGGGAGTGGAAGGGGTAGTAAAGTCCAGGGTGAAGGTGGAGGACGTTGAGGTTGCAGAGCGTGGGTCATACTCCGCCAAGGACTACCATGATCCACCTCCGGCGCCGCTAATTGACGCAGAGGAGCTTGGCAAGTGGTCCTTTTACAGGGCTTTGATTGCTGAGTTCATAGCCACCATGCTTTTCCTTTACATTACCGTCCTTACTGTGATTGGCTACAAGCACCAGTCCGATACCCAAGCCAACGGCGATATCTGTGGTGGCGTCGGCATTCTGGGCATTGCCTGGGCCTTCGGTGGCATGATCTTCATTCTTGTTTACTGCACCGCCGGAATCTCAGGAGGTCACATTAACCCAGCAGTGACATTTGGGCTGTTCTTGGCTCGCAAAGTGTCACTGATCAGAGCCATCTTGTACATGGTGGCTCAGTGCTTGGGAGCTATCTGTGGAGTTGGGTTAGTAAAGGCCTTCCAAAAGGCTTACTACGCCAAGTACGGTGGTGGGGCCAATACTCTGAGCGATGGCTACAGCACCGGCACCGGTTTAGGTGCTGAGATCATCGGAACCTTTGTTTTGGTATACACTGTGTTCTCTGCTACTGATCCCAAGAGGAGCGCTAGAGACTCCCATGTGCCTGTTTTGGCTCCACTTCCCATTGGGTTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCAGTCACCGGTACCGGAATCAACCCGGCAAGGAGTCTTGGAGCTGCTGTTATTTACAACCAACAGAAAGCCTGGGATGACCATTGGCTCTTCTGGGTGGGGCCATTCATTGGGGCAGCCATAGCAGCATTCTACCACCAGTTCATCTTAAGGGCAGGAGTAGCTAAGGCTCTTGGATCATTCAGGAGCAACCCTTCTGTTTAA 912 0.5219 MQRRQKGVEGVVKSRVKVEDVEVAERGSYSAKDYHDPPPAPLIDAEELGKWSFYRALIAEFIATMLFLYITVLTVIGYKHQSDTQANGDICGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAILYMVAQCLGAICGVGLVKAFQKAYYAKYGGGANTLSDGYSTGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQQKAWDDHWLFWVGPFIGAAIAAFYHQFILRAGVAKALGSFRSNPSV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2583 303 PRINTS Major intrinsic protein family signature 103 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g2583 303 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g2583 303 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g2583 303 PRINTS Major intrinsic protein family signature 265 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g2583 303 PRINTS Major intrinsic protein family signature 189 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g2583 303 PRINTS Major intrinsic protein family signature 140 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g2583 303 Gene3D Glycerol uptake facilitator protein. 40 303 IPR023271 -
Lele06g2583 303 FunFam Probable aquaporin PIP1-2 40 301 - -
Lele06g2583 303 TIGRFAM MIP: MIP family channel proteins 59 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g2583 303 CDD MIP 55 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g2583 303 SUPERFAMILY Aquaporin-like 48 288 IPR023271 -
Lele06g2583 303 ProSitePatterns MIP family signature. 121 129 IPR022357 -
Lele06g2583 303 Pfam Major intrinsic protein 48 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele06g2583 303 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 22 290 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2583 Lele-ChrLele06 33625122 33628353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2583 23 303 Major Intrinsic Protein MIP AT3G54820 82.206 4.82e-176 486