Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2566 ATGCCGCCTGAACCACTGCCGTGGGACCGGAAGGATTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCGCTGGGCTCTGTGGCGCGATGGAGAGACTCTTCTCATCCTGTTTCCCGAGAGTTCAGTCGGTGGGGATCGGCCGATTTCCGCAGACCGCCAGGTCATGGTAAGCAGGGAAGTTGGCACCTGTTTTCCGAAGATTCTGGTCACGGATATGCACTATCTCGGTCCAGTGACAAGATGGTGGAAGAAGAGAACTGTCGTCCATCTGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAAAATAGAGGATCCTTTAGCCAGAGAGATTGGAGAGGACATTCATGGGAGGCCACCAACGGCTCTCTAAATTTTTCCAGGAGGCCATCGGATGTGACTATTGACCAGAGGTCAGCTGATGACATGCTAACATATCCTTCTCATCCTCATTCTGATTTTGTTAATACTTGGGATCAGCATCATATGAAAGACCAGCACGATAAGATGGGTGGTGTCAAAGGGTTGGGTACTTCACAGAGATTGGATAGGGAGCATTCTCTTGGTTCGATTGGCTGGAAGACTCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCACACAAGTAGTTCAAGGAGTGGAGGGGCAGATTCCAATGAAGCAAAGTCTGAATTGCATCCAAAAAATGCAACTCCTATTGAATCCCATTCCGGGGATGGTGCTGCATGTGTGACATCTTCTGCACCCTTTGAAGATACAATATCTAGGAAGAAGCCTCGGTTGAATTGGGGTGAGGGACTTGCAAAGTATGAGAAGAAGAAAATTGAGGAACCTGATATAAGTGCTAGCAAGGATGGCCCTGTCTTGTCTACTAGTAATATTGAGCCCTCTAGTTTTCTTGGTTCAAATTTATTGGATAAAAGCCCAAAAGTTGAAGGCTTTTCAGATTGTGCATCCCCAGCTACACCATCTTCTGTTGCCTGCAGTTCCTCACCAGGTGTGGAGGATAAACTGTATGGAAAAGCTGTGAATAGTGACAATGATGTTAGTAATATGAATGGCTCACTGGACCCCGGGCCTCAGAATCATCTACAGACGTTCTCTTTGAATTTAGAGAAGTTGGATATCGAGTCCCTGAGTAGTTTGGGTTCTTCACTTATTGGGTTGCTACAATCTGATGACATAAGTTCTGTGGATCCTGGCATATCAAGTTCTGCCGCAATGAATAAGTTGCTGATATGGAAAGCTGACCTTTCTAAGGTATTGGAGGTTACTGAAGCTGAAATAGATTTACTAGAAAGTGAGTTGAAGTCACTGAAATCTGAATCTGGAAATAGCTGCCGTTGTCCTGCAGCATTGGCCTCCTCACTGGTGGCAAACAATACAAAGCCTTGTGAAGAACAAGTTAGAGGCTATGATAAGGTATCCCGGCCAGAGCCATTGCAGGTTTGTTCTTCTGCTGATCCTGATGTGGAGAAGGTGTCCCCTTCAACTAAAGTGCATAATATTCCTGAAAATGGCAAGGAGGAAGATATTGATAGTCCTGGAACAGCAACTTCTAAATTTGTGGAGCCTCAACCCCTTATAAAAGCAGTCTCTTGTGATATAGGGGTAAATGGTAATTGCTCTGGAGGCTTTGATGCCATTCAATCTGCAAGCACTAGATGCTTAGTGCCCTGTTCCACTAGTGAGCAAGCCATGGAGGTAAAAGATGGCATGGGTGCTGCTCCTGGTGCAAGTACTTGCTCTAGATCTGAGGATGCATTGTGTAGTGCAATTATTGCTTCTAATAAAAAATATACAAGCAGAGTGTGTGAAGAATTTGCTCAGTTATTGCCAAAAGATTGTTTTAAGGTTGGTAATATAGGAGCTATCAATAATTTATGCTCTTCAACTGCTGCAGTTAGAGAAAAATTTGCAGAGAGGAAGCAGTTAGCAAGGATTAAGGAGCGAGTAATAACCCTAAAGTTTAAAGCCTTGCATCATAAATGGAAAGAAGATATGCGATTACTGTCTGTACGAAAATGTCGCCCAAAATCTCATAAGAAACTTGAAGTAGGCATTCGAACTACTAATAATGGTTTTCAAAAGAATCGGTCCTCCATTCGTTCTCGGATTTCCTACCCTGGAAATAATTTAAGCTTGGTTCCAACATCCGAGATAAATAATTTTGCCAGCAAACTTCTCTCTGATCCCCAAGTTAAAGTTTACCGGAGCACCTTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAAAAGATGGTATCGAGGTTTCCATGCAGTAATGGGTTGATTGAAGATCCTTTGGGGTATGAGAAAGAGAGGGCTATGATCAACCCTTGGACATCAGAAGAGAAAGATATTTTCTTGGAGAAATTTGCTGCTTTTGGGAAAGACTTTTGGAAAATTGCTTCTTTTCTTGATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGTTTTGAGAAAATCAAGCAGGATGTTAGGAAGCTAGGGAAGTCATATTTGACCAACACTGACTTGGTAGCATCAGGTAAAAAATGGAATAGAGAAATAAATGTTGCTTCGCTTGAGATTTTGAGTGCAGCTTCAGTGATAGCAGGCCATGCAGACAGAATAAATGGTAATAAAAAATTGCGTTCGGGAAATTCTCTTCTAGGGGGCTATGGTAATATGAAAAGATCGAAGGGGGAGAATAGCCTTCTAGAGAGACCTAACAGTTTTGATGCTCTTAGGGATGAAAGAGAGGTAGTTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTATATCATCTGAGGCTATGAGTTCTTGCATAACAAGTTCTGTTGATCCTGTAGAGGGTAGCAGGGAGAAGAGCCTTAGAACAAACCCTGGGAAAAAGCAATGGTTGATGCCTGTTGTTACTCATAGTGTTGATGATGATACCTGTTCAGATGAGAGCTGTGAGGAGATGGATCCTGCTGATTGGACTGATGAGGAGAGGTCAGCTTTTCTTCAGGCTGTATCATCTTATGGGAAGGACTTTGCTAAGATATCACGGTGTGTAGGTTCAAGGTCCCAAGATCAGTGTAAAGTGTTCTTCAGCAAGGCTAGGAAATGTCTTGGATTGGATCTCATGAGGCCCAAGTTTGTAAATGCAGGATACCCAGTGAATGATGATGCAGATGGTGGTGGGAGTGATACAGATGATGCATGTGTTGTAGAGACTGATTCAGCAATTGGCGCTGATAGGTCAGGCACTAGAACTGATGAGGATCAGCCATTGTCTGTCAAGAATGCGTACTCTGATGAATTTAATTTTGTTGAACCCATGGTCTTGTCAACTGATTTGAATAAATCAAATAATATTGGGGTAGAAGTGGATCAAGATGGTGAAGATGTGGATGATATGGTTTCTGATGCTTGTGAAATGGATGATAAGCCTAAACTGGGCCATGTTGGTGGTGGGGATGTCTTTTACAGTTCTGACAAGTCTGGTCCTGCCAGTGGCCAGACAGCTATGAATATGTTATTTAGTGTAGAAGTGGGAGAAGTTGAAGCAAATAAATTGGCAGGTGCAGTTACAGATTCTGTACCATACCAATCTAACTCTGTTGCTGAGGCTGAAGTGGTTTCTGAGGTTTCTTCCGGGGGTCTTGGAAAGGAGTTAACAGGGCAGAAACAATCACTGCCTCCATGTCTTGATGATAGGGATAATAAACGTGAAGCAGTTGCTGATTTAGCTGAATCAAAAAGCCCAGTCCAAGATTCAAGTACAATGGTAAATGCTTCGCCCTTACCTGCAGGCGCTTCTTGTACAGGCTTGAATCTTGAAGTTGATAATAAGCACCAAGCGTCTCATGGAGAGCCCTGTATATCAGCATTGCCACTGGGGGATATTCAGTCCAATAAAAAATTATTGTTGCAAGATACTATTGCTGTTCATGGTGAGCAAAAAGTTATTCAAGATCACCTGCCTTCTGCACAGAATTTTCAGGGGAGTAGAGACGTGCACCGTCAAAATTCCACTAGCAAAGATGGTCAACATGCTCATATTCCCAGCCATCTATTGGACCATGTTGAGGCTAGTAGCATCCTGCAAGGCTTTTCCTTGCCCATTAAACAGGAAGTGAAGGGTAATGTTAGTTGCAGCAGTTCAGCATCTGAATTGACACTCATGTCCCAAAAGACTGAACAAGCCTGTGATCGTTATAAATCAGAGTCACGCCATTCAGTAGATTCTGAAGTGACTTCCAGAAATGGTGATGTGAAGTTGTTTGGGAAGATATTAACCAATCCTTCATCTACTCAGAAATCTAATTTGAATTCCAAGGGACGTGAAGAAACTGGTACCCGTCATCCGAAGATGAGTGGCAGCAAGGCTTCCACCCTGAAATTTAATGGTCATTGCCATCAAAATCCTGATGGAAATTCAACAATTTTGAAGTTCGATTGTGGTGATTACGATATAGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAATAAAATACAGACTGGCATTCCTTCGTTACCTGATTCTGCCATCTTGCTTGCAAAATATCCTGCTGCCTTTAGTAATTATGCTACATCCTCATCTAAACTGGAGCAGCAGTCATTGCATGCATTTGCCAAGAGTAATGAACAGCACATGAATGGCACTGCATTCACAACTCGAGAAATCAATAGCAGCAATGGTGTAATTGATTATCAGATGTGTAGAAGTAGGGATGCCCCGAAAGTGCAGCCTTTTATGGTAGACATGAAAAACCGGCAAGATGTGTTTTCTGAGGTGCAGAGAAGAAATGGTTTTGAAGCAATAGCAAATTTACAGCAGCAGGGGAGAGGAATGGCTGGATTGAATGGTGTTGGAAGGACCGGTATTCGGGTGGGAGGATCACACAGTGGTGTCTCAGATTTTGTGGCAGCCATTAAAATGCATTATTCCAATTCTGAGCAGTATGGTGGTCATAATGGAAGTAGTATCATGAGCGAAGATGAATCATGGGGAGGAAAAAAAGGGGACTTAAGCAGGTAG 5079 0.4296 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHPVSREFSRWGSADFRRPPGHGKQGSWHLFSEDSGHGYALSRSSDKMVEEENCRPSVSRGDGKYGRNSRENRGSFSQRDWRGHSWEATNGSLNFSRRPSDVTIDQRSADDMLTYPSHPHSDFVNTWDQHHMKDQHDKMGGVKGLGTSQRLDREHSLGSIGWKTLKWTRSGSLSSRGSGFSHTSSSRSGGADSNEAKSELHPKNATPIESHSGDGAACVTSSAPFEDTISRKKPRLNWGEGLAKYEKKKIEEPDISASKDGPVLSTSNIEPSSFLGSNLLDKSPKVEGFSDCASPATPSSVACSSSPGVEDKLYGKAVNSDNDVSNMNGSLDPGPQNHLQTFSLNLEKLDIESLSSLGSSLIGLLQSDDISSVDPGISSSAAMNKLLIWKADLSKVLEVTEAEIDLLESELKSLKSESGNSCRCPAALASSLVANNTKPCEEQVRGYDKVSRPEPLQVCSSADPDVEKVSPSTKVHNIPENGKEEDIDSPGTATSKFVEPQPLIKAVSCDIGVNGNCSGGFDAIQSASTRCLVPCSTSEQAMEVKDGMGAAPGASTCSRSEDALCSAIIASNKKYTSRVCEEFAQLLPKDCFKVGNIGAINNLCSSTAAVREKFAERKQLARIKERVITLKFKALHHKWKEDMRLLSVRKCRPKSHKKLEVGIRTTNNGFQKNRSSIRSRISYPGNNLSLVPTSEINNFASKLLSDPQVKVYRSTLKMPALILDEKEKMVSRFPCSNGLIEDPLGYEKERAMINPWTSEEKDIFLEKFAAFGKDFWKIASFLDHKTTADCVEFYYKNHKSECFEKIKQDVRKLGKSYLTNTDLVASGKKWNREINVASLEILSAASVIAGHADRINGNKKLRSGNSLLGGYGNMKRSKGENSLLERPNSFDALRDEREVVAADVLAGICGSISSEAMSSCITSSVDPVEGSREKSLRTNPGKKQWLMPVVTHSVDDDTCSDESCEEMDPADWTDEERSAFLQAVSSYGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDLMRPKFVNAGYPVNDDADGGGSDTDDACVVETDSAIGADRSGTRTDEDQPLSVKNAYSDEFNFVEPMVLSTDLNKSNNIGVEVDQDGEDVDDMVSDACEMDDKPKLGHVGGGDVFYSSDKSGPASGQTAMNMLFSVEVGEVEANKLAGAVTDSVPYQSNSVAEAEVVSEVSSGGLGKELTGQKQSLPPCLDDRDNKREAVADLAESKSPVQDSSTMVNASPLPAGASCTGLNLEVDNKHQASHGEPCISALPLGDIQSNKKLLLQDTIAVHGEQKVIQDHLPSAQNFQGSRDVHRQNSTSKDGQHAHIPSHLLDHVEASSILQGFSLPIKQEVKGNVSCSSSASELTLMSQKTEQACDRYKSESRHSVDSEVTSRNGDVKLFGKILTNPSSTQKSNLNSKGREETGTRHPKMSGSKASTLKFNGHCHQNPDGNSTILKFDCGDYDIGLENVPMRSYGYWDGNKIQTGIPSLPDSAILLAKYPAAFSNYATSSSKLEQQSLHAFAKSNEQHMNGTAFTTREINSSNGVIDYQMCRSRDAPKVQPFMVDMKNRQDVFSEVQRRNGFEAIANLQQQGRGMAGLNGVGRTGIRVGGSHSGVSDFVAAIKMHYSNSEQYGGHNGSSIMSEDESWGGKKGDLSR 1692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2566 1692 MobiDBLite consensus disorder prediction 204 227 - -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 1 30 - -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 116 135 - -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 204 267 - -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 1340 1360 - -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 1668 1692 - -
Lele06g2566 1692 Coils Coil 424 451 - -
Lele06g2566 1692 SUPERFAMILY Homeodomain-like 1003 1052 IPR009057 -
Lele06g2566 1692 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1006 1055 IPR017930 -
Lele06g2566 1692 SUPERFAMILY Homeodomain-like 772 834 IPR009057 -
Lele06g2566 1692 ProSiteProfiles Myb-like domain profile. 998 1048 IPR001005 -
Lele06g2566 1692 ProSiteProfiles SANT domain profile. 1005 1052 IPR017884 -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 1225 1247 - -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 489 528 - -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 8 27 - -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 42 135 - -
Lele06g2566 1692 Gene3D - 965 1060 - -
Lele06g2566 1692 CDD SANT 1006 1044 IPR001005 -
Lele06g2566 1692 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1688 - -
Lele06g2566 1692 Gene3D - 766 838 - -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 78 114 - -
Lele06g2566 1692 SMART sant 786 834 IPR001005 -
Lele06g2566 1692 SMART sant 1002 1050 IPR001005 -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 164 189 - -
Lele06g2566 1692 Pfam Myb-like DNA-binding domain 1005 1045 IPR001005 -
Lele06g2566 1692 ProSiteProfiles SANT domain profile. 785 836 IPR017884 -
Lele06g2566 1692 MobiDBLite consensus disorder prediction 1442 1470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2566 Lele-ChrLele06 33408197 33415264 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele06g2566 Myb_DNA-binding 1.1e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2566 06 33408197 33415264 Lele07g2604 07 31424977 31432263 hybridization
Lele06g2566 06 33408197 33415264 Lele08g2501 08 30697510 30704585 hybridization