Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2556 ATGGGGAGGAAAGGGAGTTGGTTTTCTTCAGTGAGGAAAGTTCTCAATCCTCATCCCAAGAAAGATCAGGATAAAAAGCAGAAGTCAAATGAAGTAGTAGGTTATGACAAAGCTTTGCCAAATGAAGGAGCACAATTTGCTGTTCCTCCTGCTCTTCCATCCACAGGAGCAGAGAATGAGCAGAGCAAGTTGGCTTATTCTCTGGCTCTTGCCACTGCTGCTGCAGCAGAGGCTGCTGCTGCTGCTGCTCAGGCTGCAGCAGAGGTTGTTCGTCTTACTAGCAAGTCCTGTTACCGTGGAAAGTCGAAGGAAGACATAGCAGCTATCAAAATTCAGACAGCATTTCGAGGATATTTGGCAAGAAGAGCATTGCGTGGCTTGAAAGGTTTGGCGAGGTTGAAGAGAATGATACAGGGGAAATCTGTTAAACGACAAGCAGCTTCTACCTTAAGATGCATGCAGACCCTCACACGATTGCAGTCTCAGGTCCACGAGAGGAGGGCTAGAATGTCAGAGGAGAACCAAGCTCTTCAGGGGCAGCTGCAGCAGAAACAAGCAAAAGAACTTGAGAAGTTGCAAGCTGCTCAGATTGTCGAAGATTGGGATGATACAGCACAATCAAAGGAGCAAATTGAAGCAAAACAGTCTAAAAGGCAGGGAGCTGCAGTTCGAAGGGAGAGAGCTATGGCCTATGCATTTTCACATCAGAAAAAGTGGAGGAACTCTTCAAAATCTGCAGACCCCACCACATTTGTGGGTCCAATCAATCCACACTGGGGTTGGAGTTGGCTAGATCGATGGGATACCCAAAGTGGTACGGTTCACGGCGAGCGTGCATCGACAAGGAGCATGGCCGGCCAACCCTTGTCTGTTGGAGAAATTACTAAAATATATACTTCTCGCGGTCCTATTCATCACAATAATAGCAAGCCTTCTCCAGTCGGCCAAAAATCAAGCCGGCCCCCAAGTCACCGGTCTTCTTCAACCACACCTCAAAAGGCCCCATCTGTCTTATCTAATTCCGGCAAAGTAAGGGAACCAATCCCAAAGACATCTTCTTGGGGCCGTGATGATGACTTGAGGAGCACAATTAGTACTCAGTCACATCTGTACCACAGACATACTATTTCAGGATCATCTTTTAGAGATGACGAGAGCATTGGAAGCTCATCCGCCCTCTCAACTTGCACGGTTCCTACCAAGTCAGCTAAGGCCAAATCCAGAATTGAGAGCCCATCACAAAGTTCAGATAAAAGTGGGACACCAGAGAAAGGATCCAATGCGAAGAAGCGATTATCCTTCACAGATTCACCGGCTCGTTTGAGGAATCATTCTGGTCCTCTTCAGGTGGATGTCGTGGCTTCCAATAAGGATGTTGCTTCAGTCACTAAGAAGAAAGTTGCCAATGGTGGCAGGTAG 1419 0.4743 MGRKGSWFSSVRKVLNPHPKKDQDKKQKSNEVVGYDKALPNEGAQFAVPPALPSTGAENEQSKLAYSLALATAAAAEAAAAAAQAAAEVVRLTSKSCYRGKSKEDIAAIKIQTAFRGYLARRALRGLKGLARLKRMIQGKSVKRQAASTLRCMQTLTRLQSQVHERRARMSEENQALQGQLQQKQAKELEKLQAAQIVEDWDDTAQSKEQIEAKQSKRQGAAVRRERAMAYAFSHQKKWRNSSKSADPTTFVGPINPHWGWSWLDRWDTQSGTVHGERASTRSMAGQPLSVGEITKIYTSRGPIHHNNSKPSPVGQKSSRPPSHRSSSTTPQKAPSVLSNSGKVREPIPKTSSWGRDDDLRSTISTQSHLYHRHTISGSSFRDDESIGSSSALSTCTVPTKSAKAKSRIESPSQSSDKSGTPEKGSNAKKRLSFTDSPARLRNHSGPLQVDVVASNKDVASVTKKKVANGGR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2556 472 Coils Coil 167 187 - -
Lele06g2556 472 MobiDBLite consensus disorder prediction 379 472 - -
Lele06g2556 472 MobiDBLite consensus disorder prediction 301 339 - -
Lele06g2556 472 MobiDBLite consensus disorder prediction 1 34 - -
Lele06g2556 472 MobiDBLite consensus disorder prediction 15 32 - -
Lele06g2556 472 PANTHER IQ-DOMAIN 5-RELATED 1 447 - -
Lele06g2556 472 MobiDBLite consensus disorder prediction 379 442 - -
Lele06g2556 472 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Lele06g2556 472 MobiDBLite consensus disorder prediction 300 360 - -
Lele06g2556 472 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Lele06g2556 472 SMART iq_5 103 125 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2556 Lele-ChrLele06 33292534 33295586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2556 1 451 IQD Protein Family AT5G03040 41.314 4.13e-99 303