Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2548 ATGTCATCCTCGGATCTGACTTTTAATGATTTATCATCCGAGTTCGATAACCTCCCTGTTCCATCCATAGAATCGCTCTTTTTCTCAGGCAACGACCATGCCATGCCCTCTGAAGCATTCGCATCAGATCTTGACTTAGCCATTGAGTTGGGGAATGATGGAGATTTTGAGATTTCCTTTGACGATCTCAGCGATCTCCATATTCCTGAAGAAACGGATGATTTCCTACTCCCTGATGGCTATGCTCAACCGCTTGGATCGCATGTGTTGAATGACGATGACAAGCTGTTGAACTACTACGGTACCAATTCTGGGTCACGTGACCCGAATAGTTCTTCAGGTTCGGGGAATCGGAATCCTGATGTTGCAGAGTATTTTAATACACAATCACCTGAGTCCGGCAGTTGCGATCGTTCTGTGACCCACTCTTTGGATAATTCAAGTGATCAGAACTCATATCATTCACTTCATGTCAAAGTTTCGAGCTTTAAATCGCCAGATTCTGATTCTTGCGACCGGGAATCTTCTGGTGGGTCCATTTCATCACAGGGGTCAGGCAACGGTGGTCTAGGCGACTCGTATGCTTATGAAGTGATGAAAACGTCTTCACCGGATTATCACTGCGACGACAGAGAAATTTCTTCTCATGGGATTGCTGATCAGAATATAAAATTGGAGGACCTGGGTAAAAATTGTGATTTGAAAAGGAAGAAGCTCCAGAATGAAGGGAATTATGAGGAGAGAACTACCAAGCACCGAAAGTCGGCGATGCCTACGGTTAATACAACTCAACAATCTGATCTTAATGCCGTGGATGACGAGGACGAGAAAAGGAAGGCTAGGCTGATGAGGAATCGAGAAAGTGCCCAGCTCTCCAGACAGAGAAAGAAGCACTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCTACCATAACTGATTTAAGCGGTAAGGTATCGTTTGTTATGGCCGAGAATGCTGCTTTGAGACAGCAATTGAGTGCTGGTGGAATGTGCCCGCCACCAGCTCCAGGGATGTACCCTCATCCTCCAAGGGCGCCCATGACCTATCCATGGGTGCCTTATGCACCCTATGTTGTCAAACCGCAAGGTTCTCAGGTTCCACTGGTTCCAATCCCCAGATTAAAGTCTCAACAGTCGCAATCTGCTCCAAAGGCCAAAAAGTTCGAGAATAAGAAGACTGAGGGAAAAACTAAGAAGGTTGCTAGCATTAGTTTGTTGGGTTTGTTTTTCTTTATATTTCTTTTTGGTGGACTCGTTCCTCTAGTTAATGTGAAGTTTGGAGATATAAGGGACAAAGTTCCTGGGAGGCCCATTTCTGCTACTGATAGGTTCTATAGTCAGCACAAAGGAAAAGCTTGGGAGGTTAGTGGTCATAGAAATAAATCTGAAGGAGAAAAGGGAGTAAGATTCACTAGGGGGAATTTGGGTGTTTCCGACAGAATGTTTATTGAGAAAGGTCGCAAATTAGAAGAAACACTGAGACAGCAGGATTCGCCATATAGAATGAGCTCAGGTGACTTAGTTCACAGGGGAAATGCTAGTGAGCCAGAGCCTCTTCTTGCTTCTCTGTATGTTCCAAGGAATGATAAGCTTGTGAAAATTGATGGTAACTTGATAATTCACTCTTTTCTGGCCGCTGAGAAAGCCATGGCATCTGATACTGCTCATACTGAAAAGAGTACGAGAGAAAATGGATTGGTGATTTCTAAAAATTGGGATTCTGCACTGGCTATTCCTGAAGTTGGAAGGAACAGTGGTCAACGTCCTCCCGCATATAGGAGCCCGCCTGAACAGCGGAAGGCTCTTGCCTCTGGTTCAGCCGAAACATTGAAGAACCATTTAAAGTCAACTGCGACTGATGGTAAAATGCAACAATGGTTTCGTGAAGGTCTTGCTGGGCCAATGTTGAGTTCTGAGATGTGCACAGAGGTTTTCCAGTTTGATGCCTCGCCAAAACCGGGAGCTATAGTTCCGGCATCATCAATTGCAAATGTTTCTGCCGTTAACCGCCAGAACGATACAAGCATCAACAAGCGAAGGAATAATAGAAGGTTCCTTCACAAGCTACCACATTCCCTCGCCAGATCTGGTCTCAACACAAGTGAAGAACATGGTATGAAAAATTCCCAGAATGAGAACCTCCATGTTAATAATAAATCAACATCTTCCATGGTGGTTTCGGTTCTTGTTGATCCCAAAGAGGTGGGAGATGGTGACGGGGATGGTGTGATGAAACCTAAATCACTTCCTCAGATTTTTGTGGTTGTGCTTATAGATAGTGTCAAGTATGTCACCTACTCATGTGGCCTTCCACGAGCATCTCCTCATCTTGTGACCGCCTGA 2373 0.4492 MSSSDLTFNDLSSEFDNLPVPSIESLFFSGNDHAMPSEAFASDLDLAIELGNDGDFEISFDDLSDLHIPEETDDFLLPDGYAQPLGSHVLNDDDKLLNYYGTNSGSRDPNSSSGSGNRNPDVAEYFNTQSPESGSCDRSVTHSLDNSSDQNSYHSLHVKVSSFKSPDSDSCDRESSGGSISSQGSGNGGLGDSYAYEVMKTSSPDYHCDDREISSHGIADQNIKLEDLGKNCDLKRKKLQNEGNYEERTTKHRKSAMPTVNTTQQSDLNAVDDEDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSGKVSFVMAENAALRQQLSAGGMCPPPAPGMYPHPPRAPMTYPWVPYAPYVVKPQGSQVPLVPIPRLKSQQSQSAPKAKKFENKKTEGKTKKVASISLLGLFFFIFLFGGLVPLVNVKFGDIRDKVPGRPISATDRFYSQHKGKAWEVSGHRNKSEGEKGVRFTRGNLGVSDRMFIEKGRKLEETLRQQDSPYRMSSGDLVHRGNASEPEPLLASLYVPRNDKLVKIDGNLIIHSFLAAEKAMASDTAHTEKSTRENGLVISKNWDSALAIPEVGRNSGQRPPAYRSPPEQRKALASGSAETLKNHLKSTATDGKMQQWFREGLAGPMLSSEMCTEVFQFDASPKPGAIVPASSIANVSAVNRQNDTSINKRRNNRRFLHKLPHSLARSGLNTSEEHGMKNSQNENLHVNNKSTSSMVVSVLVDPKEVGDGDGDGVMKPKSLPQIFVVVLIDSVKYVTYSCGLPRASPHLVTA 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2548 790 SMART brlzneu 273 337 IPR004827 GO:0003700|GO:0006355
Lele06g2548 790 Coils Coil 300 320 - -
Lele06g2548 790 MobiDBLite consensus disorder prediction 100 165 - -
Lele06g2548 790 Pfam bZIP transcription factor 276 335 IPR004827 GO:0003700|GO:0006355
Lele06g2548 790 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 275 338 IPR004827 GO:0003700|GO:0006355
Lele06g2548 790 SUPERFAMILY Leucine zipper domain 277 335 IPR046347 GO:0003700|GO:0006355
Lele06g2548 790 MobiDBLite consensus disorder prediction 172 189 - -
Lele06g2548 790 MobiDBLite consensus disorder prediction 100 196 - -
Lele06g2548 790 FunFam bZIP transcription factor 49 276 338 - -
Lele06g2548 790 MobiDBLite consensus disorder prediction 590 619 - -
Lele06g2548 790 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 51 787 - -
Lele06g2548 790 Gene3D - 275 340 - -
Lele06g2548 790 CDD bZIP_HY5-like 278 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2548 Lele-ChrLele06 33219368 33222291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2548 13 789 bZIP Transcription Factor Family AT2G40950 44.906 1.43e-156 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele06g2548 bZIP_1 4.3e-11 CL0018