Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2544 ATGAAGCCCATTTCAATAAAGCCCAAAACCCATAATGCTAATAGGCCCAAGTCCCTTTTTCTCTCACTCTTCAATTCGTCGTCCACACGACGCTCCTCTAATCCGGTCTCCTCTACCGGCCGTCACGGTGATTGTTTGTTGAGCATCGACTTTCCTTCATCTCCTCTCCACTCCATCTGTTCATTGTCTCTCCTTCATCGGTTCTCAATCCCCCGAAATCTCTCCTCAGTCCTCAGTCCTCAGTCCTCAGTCCTCAGTCCTCAGTCCTCACTCCAGCGCTACCTCGACCGTCGACCACGCATCCTTGTCGCTGCTACCACTTTCTCTTGCATTGGGCTCCTTGATCGTACAGCTCCAATTTGTTTGGGCTTTTTTCACTTTTCAGATCCAGATACAGCCATGTCGGGAAACACAAGTTGCACCGTTTACATTGGCAATCTAGATGAGAGAGTCACGGAGAGGATCTTATATGATATATTGATTCAAGCGGGACGAGTGGTGGACCTGTATATTCCTAGAGATAAGGAATCTGAGAAACCTAAAGGATTTGCCTTTGCAGAATACGAAAGTGAGGAGATTGCAGATTATGCTGTCAGGCTTTTCTCAGGCCTTGTGACACTATATAACAGAACGCTGAAGTTTGCGATATCTGGTCAAGACAAACCTACTCCAAATGGTTCTGGAGTGGCTACACCGTCATCAAATTCTTCTCACCGGTCGAGGCCCCACCCTGTGCCAATAAATAATACAGAAATTTCTCCGCACTCTGCTAGGTTACCAACACCTAGCCGAATTTCAGATAATTCCGGTAATTACTCCCGAGATACCCACCGGGTAGTTGACCAATCTAGTGAGTATGGATCTCTCTACAATGGCAACGATTATGAATACAGCCGGAGAGTCTTTGGGCCAACATTGGATAGCATTAGCCGGTATAGGTCACGCCGCTATGATACGAGTAACCCAATCTCTTACCCATATCACTAA 987 0.4681 MKPISIKPKTHNANRPKSLFLSLFNSSSTRRSSNPVSSTGRHGDCLLSIDFPSSPLHSICSLSLLHRFSIPRNLSSVLSPQSSVLSPQSSLQRYLDRRPRILVAATTFSCIGLLDRTAPICLGFFHFSDPDTAMSGNTSCTVYIGNLDERVTERILYDILIQAGRVVDLYIPRDKESEKPKGFAFAEYESEEIADYAVRLFSGLVTLYNRTLKFAISGQDKPTPNGSGVATPSSNSSHRSRPHPVPINNTEISPHSARLPTPSRISDNSGNYSRDTHRVVDQSSEYGSLYNGNDYEYSRRVFGPTLDSISRYRSRRYDTSNPISYPYH 328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2544 328 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 142 213 IPR000504 GO:0003723
Lele06g2544 328 Gene3D - 123 225 IPR012677 -
Lele06g2544 328 SMART rrm1_1 141 215 IPR000504 GO:0003723
Lele06g2544 328 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 140 219 IPR000504 GO:0003723
Lele06g2544 328 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 134 325 - -
Lele06g2544 328 MobiDBLite consensus disorder prediction 218 290 - -
Lele06g2544 328 SUPERFAMILY RNA-binding domain, RBD 127 240 IPR035979 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele06g2544 Lele-ChrLele06 33181671 33184065 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2544 06 33181671 33184065 Lele07g2579 07 31166240 31169303 hybridization
Lele06g2544 06 33181671 33184065 Lele08g2482 08 30476717 30478223 hybridization