Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2531 ATGGAGCTTTGCGCAGGTGGTGAGCTTTTCGATAGGATCATTCAGAAGGGGAATTACCGTGAGAAAGAGGCGATCAAGTTGATAAAGACCATTGTTGAAGTTGTGGAAGCTTGTCCCGCTCTTGGGGTCATGCATAGGGATCTCAAGCCCGATAATTTCTTTTTTGAAAGTCAGTATGAAGATGCCAAGATGATGGCTACGGATTTTGGGTTGTCTGGGTTGCCAATGACAAAATGCTGTCCGATCTCTCACGTTTGTTTGTTTTTCGTGATTGTTATTATGCTTCTAATCATTAGGAGAATTGATGGACAATCCTTTGCTGATGTGGTTGGAAGTCCGTATTATGTTGCTCCTGAGGTGCTATGCAAGCATTATGGACCAGAAGCAGATGTGTGGAGTGCTGGTGTTATCTTATACATCTTACTGAGTGGGGTCCCACCTTTCTGGGCTGGTAATGATTTTAATGTGTTTCTGTGA 477 0.434 MELCAGGELFDRIIQKGNYREKEAIKLIKTIVEVVEACPALGVMHRDLKPDNFFFESQYEDAKMMATDFGLSGLPMTKCCPISHVCLFFVIVIMLLIIRRIDGQSFADVVGSPYYVAPEVLCKHYGPEADVWSAGVILYILLSGVPPFWAGNDFNVFL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2531 158 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2531 158 Gene3D Transferase(Phosphotransferase) domain 1 1 158 - -
Lele06g2531 158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Lele06g2531 158 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2531 158 Pfam Protein kinase domain 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2531 158 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 149 - -
Lele06g2531 158 SUPERFAMILY Protein kinase-like (PK-like) 1 156 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2531 Lele-ChrLele06 33086420 33087483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2531 1 157 EF-hand Containing Proteins AT5G23580 58.599 5.67e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele06g2531 Pkinase 1.2e-29 CL0016