Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2526 ATGGCATCACCCCACCAGTTTTCTGAGAGGTCTTCAATGGCGGATATGGATCAATCATGTGTGCCACCAGGATTTAGATTTCATCCAACAGAGGAAGAACTTGTAGGATATTACCTCACGAGGAAGATTAACTCTCTCAAAATCAACCTAGATGCGATTGTTGAGCTTGATCTCTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAGCAGAATGAGTGATCGACTATTGAGAGATTTGACAGAATTTCACGTAGGCTGTTGAAAAAGTCTGAAACATTGAACTCATTGGTAATGCAGGAAGAAGGATGGGTAGTGTGCCGAGCATTCAAAAAGCCAAGTCCTAGTCATCATGTGAGGGCAGGTTTTGAAGCACATTGCTATTTCAGAGATCATATGAGCAGCCATGGTGGAAGGCCCTTGATCTCTTCATTTTCTGAGATTCTGAATCAAACCCATCATTTTCTGAATAACAGTAACTCTCATCATCCAGGTACAAGCCTAAGTCCTTTAGTCAATTTGGATCAGCAGCACCAGCAACAACTTGTTGATCTTCCTCAAATAGATAGCCCTAGTTTGGGAATAAGATCATCATCGGATAATTATGGAGGCCGAAACAACATTAGTAATCTTGGGGATGATCAATATTACAGTGATGACATGGAAAGCTTGGACCATTTGTTTGCTTCAAATCTGACAGATACAACTTCTTCTTCTGCTTCTTTCTTTGCACACTCGAACTTTCCCATGAACATGATGATACCACATAACAACGAACTAGTAATACCTCAACAAAATCAAGCAAGCCAAGCCCTATGA 837 0.4086 MASPHQFSERSSMADMDQSCVPPGFRFHPTEEELVGYYLTRKINSLKINLDAIVELDLYKMEPWDIQDRCKLGYEEQNEXSTIERFDRISRRLLKKSETLNSLVMQEEGWVVCRAFKKPSPSHHVRAGFEAHCYFRDHMSSHGGRPLISSFSEILNQTHHFLNNSNSHHPGTSLSPLVNLDQQHQQQLVDLPQIDSPSLGIRSSSDNYGGRNNISNLGDDQYYSDDMESLDHLFASNLTDTTSSSASFFAHSNFPMNMMIPHNNELVIPQQNQASQAL 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2526 278 Gene3D NAC domain 30 92 IPR036093 GO:0003677|GO:0006355
Lele06g2526 278 Pfam No apical meristem (NAM) protein 22 73 IPR003441 GO:0003677|GO:0006355
Lele06g2526 278 SUPERFAMILY NAC domain 12 76 IPR036093 GO:0003677|GO:0006355
Lele06g2526 278 ProSiteProfiles NAC domain profile. 21 183 IPR003441 GO:0003677|GO:0006355
Lele06g2526 278 MobiDBLite consensus disorder prediction 162 187 - -
Lele06g2526 278 MobiDBLite consensus disorder prediction 200 219 - -
Lele06g2526 278 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2526 Lele-ChrLele06 33032457 33037424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2526 13 199 NAC Transcription Factor Family AT1G71930 40.408 2.64e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele06g2526 NAM 1.1e-12 No_clan