Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2522 ATGTCGAACCCAACAAAAAAGAAAAAAAAAAATCCATCTTTTGGTGCTGGCAAACGAAATTGTAGCAGGAAAGTCTCAGGTCTCGTGCGTTGTCCGGTAACTTCAGTTGGAGGAGTCGCAATTCTGTTCAGAGATGCTGGGGAGACCGTTGACCTTGCCTCCACAATCTTGTTGTTGCTCGGCAATAAAGAAGTGAAGATTTCAACAGCAGTAGCATTTAATGTAAAGAGTGCAATAAATATTTCCACAGTTCTACTGGTTTGCCTTGTGCTGCCAGCAACAGTACATTATAATGGTGCCTTTTTATTAGGGGGAAGGTGTTGGAGGGCGGTGGAATGCTTGGGTTTTAGTTATTCTGATTTTGCTGGGATTATGTCAACCGTTTTGTTACTGGTGAAGCTGCCTAAACAATCAATGTTAGTTCAGCGCTTTCAGATTATAGATGTTACAAAGGATGTGTTTGGATGTGTGTGCCATGTTGATCTTGCTCCTTCTCCACCGTGTGTCATACCATCAAACCCAAGTTTTTCGAGTAGACGTTTACCGAGCGTGAACAAAGCAGCATGGGCATCAAATGTTTCTATGAAGAAATGGATAATACATTCTGTACAGATAGATGATATGATTACAAGCAAAGAAGATCAGAGTATGTGGGAAGCCTGCAGAGGAGCTCTTTCTACATATGATTTTAGCGTTGAAGAAAAGGACAAGATACTTGGAAAAGCATTCGGCCTCGTTAACTCACCATATTGGGGAGAAGAACGCGAGAAAGAAATACCCACATTTGAAACAGTGAATGGAGTATTAGAGTATCTGAGGAGTTTAAGTCTTTCTGATGAAGATTTAACCAAGCTGCTCAAGAAATTCCCTGAGGTTCTTGGATGCAGTTTAGAGGATGAGCTGAAAACCAATGTGAAAATCCTGGAAAAGGAATGGGGCATCCAGGGAAAGTCTCTTCGGAATCTGCTCCTTCGAAATCCGAAAGTTTTGGGTTACAATGTCGATTGTAAGGGAGATTGTATAGCACAATGCACTCGATGCTGGGCTCGTTTCTAG 1056 0.4186 MSNPTKKKKKNPSFGAGKRNCSRKVSGLVRCPVTSVGGVAILFRDAGETVDLASTILLLLGNKEVKISTAVAFNVKSAINISTVLLVCLVLPATVHYNGAFLLGGRCWRAVECLGFSYSDFAGIMSTVLLLVKLPKQSMLVQRFQIIDVTKDVFGCVCHVDLAPSPPCVIPSNPSFSSRRLPSVNKAAWASNVSMKKWIIHSVQIDDMITSKEDQSMWEACRGALSTYDFSVEEKDKILGKAFGLVNSPYWGEEREKEIPTFETVNGVLEYLRSLSLSDEDLTKLLKKFPEVLGCSLEDELKTNVKILEKEWGIQGKSLRNLLLRNPKVLGYNVDCKGDCIAQCTRCWARF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2522 351 FunFam uncharacterized protein LOC106769908 201 347 - -
Lele06g2522 351 SMART mt_12 283 315 IPR003690 GO:0003690|GO:0006355
Lele06g2522 351 MobiDBLite consensus disorder prediction 1 20 - -
Lele06g2522 351 Pfam mTERF 269 332 IPR003690 GO:0003690|GO:0006355
Lele06g2522 351 Gene3D Transcription termination factor 3, mitochondrial 214 346 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2522 Lele-ChrLele06 33016509 33019440 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele06g2522 mTERF 2.2e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2522 06 33016509 33019440 Lele07g2557 07 30965135 30967325 hybridization
Lele06g2522 06 33016509 33019440 Lele08g2458 08 30307921 30310367 hybridization