Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2516 ATGCTTATGGAAGAACCCACAAGTGAAGAAGAGTTCTTAGCTTTCACAGACCTTTATAGAGTTTCCCCTTACTACCAATTCGCTCACTTCACAGCCAACCAAGCAATCCTCGAAGCCTTCGAAAACGAGGAAGACAAGAACAACCGAGCATTACATGTCATAGACTTCGATGTGTCCTATGGTTTTCAATGGCCTTCTCTGATACAATCTCTGTCGGAGAAAGCCACCAGCGGCAACAGAATATCCCTGAGAATCACAGGCTTCGGGAAGAACCTCAAAGAGCTTCAAGAAACAGAATCTCGTTTGATCAGCTTCTCAAAGGGATTCACCAATCTGGTGTTTGAATTCCAAGGTTTACTCCGTGGGTCACGAGTGATTAACCTAAGGAAGAAAAAGAATGAAACAGTGGGTGTTAATTTAGTGTCTTATTTGAACACATTGAGTAGTTTCATGAAGATTTCTGACACATTGGGATTTGTTCATTCGCTTAATCCCTCCATTGTTGTTCTTGTGGAGCAAGAAGGAAGTAGAAGCCCCAGAACGTTCTTGTCGAGATTCACTGATTCTTTGCACTATTTCGCCGCCATGTTTGATTCTTTGGACGATTGCTTACCGATGGAGAGCACAGAGAGGTTGAGGATCGAGAAGAAGCTTCTCGGGAAAGAGATCAAAGCAATGTTGAATTACTACGACGTGGACAGCGTGGATTGTCCCAATCTCGGCATGGCAGACAGTAGTGTGAAGATGGAGAAGGAGATGAAAACGATGATGATATGA 777 0.435 MLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFENEEDKNNRALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGKNLKELQETESRLISFSKGFTNLVFEFQGLLRGSRVINLRKKKNETVGVNLVSYLNTLSSFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRTFLSRFTDSLHYFAAMFDSLDDCLPMESTERLRIEKKLLGKEIKAMLNYYDVDSVDCPNLGMADSSVKMEKEMKTMMI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2516 258 ProSiteProfiles GRAS family profile. 1 258 IPR005202 -
Lele06g2516 258 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 228 IPR005202 -
Lele06g2516 258 Pfam GRAS domain family 7 228 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2516 Lele-ChrLele06 32950288 32951309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2516 18 227 GRAS Transcription Factor Family AT1G63100 37.500 1.10e-37 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele06g2516 GRAS 1.3e-60 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2516 06 32950288 32951309 Lele07g2550 07 30896490 30897947 hybridization
Lele06g2516 06 32950288 32951309 Lele08g2452 08 30247192 30248640 hybridization