Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2496 ATGGATAAGTCAGATGAATTTTCGGATTTGGAGTGGATTCGTCAATATCTTATTGGTGAGTTTTCGTCCTCGGAATCCCTCTTATCCAATCTGTATCCTGTTAAGCTCGAGGATTCTTCGTCGTCGGAGTTTGATCTGAGTCCGAGTGCTCCGGTGCAAAGTTTCTATTCTTCTGGTGAAACTTTTGGTTTTGGAGATGTGGAGGTTTTGATGAACTCCGTGTCGGAGGTCAAAATGGAGAAGAAGGAGGTGGCCACATCATCGCCTGAGGCTGATGAGAAGACCGACGAGTGCGATGAGCCGATTAGAATGAGGAGGTACAGGGGCGTTCGGAGGAGACCGTGGGGAAAGTTTGCGGCGGAGATCCGTGATCCGACCCGGAAAGGGACACGGGTTTGGTTGGGTACGTTTGATAGTGAGATTGATGCTGCGAAGGCTTATGACTGTGCTGCGTTCAGAATGAGGGGTCGAAGGGCAATATTGAACTTCCCTCTTCAGGCCGGTGAATGTGATCCGACGCCCAATCGGTGTGGCCGGAAAAGGAGAAGAGAAAGTTCCCAGGAGGGGTTGTCCCAAATTTCCCGTGAGATTTAA 594 0.5 MDKSDEFSDLEWIRQYLIGEFSSSESLLSNLYPVKLEDSSSSEFDLSPSAPVQSFYSSGETFGFGDVEVLMNSVSEVKMEKKEVATSSPEADEKTDECDEPIRMRRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFDSEIDAAKAYDCAAFRMRGRRAILNFPLQAGECDPTPNRCGRKRRRESSQEGLSQISREI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2496 197 ProSiteProfiles AP2/ERF domain profile. 106 164 IPR001471 GO:0003700|GO:0006355
Lele06g2496 197 FunFam Ethylene-responsive transcription factor 2 105 166 - -
Lele06g2496 197 SMART rav1_2 106 170 IPR001471 GO:0003700|GO:0006355
Lele06g2496 197 Pfam AP2 domain 106 156 IPR001471 GO:0003700|GO:0006355
Lele06g2496 197 PANTHER DNA-BINDING DOMAIN 71 180 IPR044808 GO:0003700|GO:0009873
Lele06g2496 197 PRINTS Ethylene responsive element binding protein signature 107 118 IPR001471 GO:0003700|GO:0006355
Lele06g2496 197 PRINTS Ethylene responsive element binding protein signature 146 166 IPR001471 GO:0003700|GO:0006355
Lele06g2496 197 Gene3D AP2/ERF domain 105 166 IPR036955 GO:0003700|GO:0006355
Lele06g2496 197 SUPERFAMILY DNA-binding domain 106 165 IPR016177 GO:0003677
Lele06g2496 197 CDD AP2 114 164 IPR001471 GO:0003700|GO:0006355
Lele06g2496 197 MobiDBLite consensus disorder prediction 174 189 - -
Lele06g2496 197 MobiDBLite consensus disorder prediction 169 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2496 Lele-ChrLele06 32757386 32757979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2496 1 192 AP2-EREBP Transcription Factor Family AT5G07580 40.488 7.38e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele06g2496 AP2 3.9e-14 CL0081