Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2474 ATGGAACCACTAGCCACCGCCAACGCCACCACTCCGCCAACCTTCCGCGGTGTTCGCATGCGAAAATGGGGCAAATGGGTCTCCGAAATCCGGGAGCCCGGCAAGAAGACCCGGATATGGTTAGGGAGCTATGACACGCCCGAGATGGCTGCAGCTGCATACGACGTAGCAGCTCTACATTTTCGCGGCCAAGCCGCACGGCTCAACTTCCCGGAGCTCATCGGCAGCTTGCCCCGGCCGGCAAGCTCTCGACCTGAGGATGTGCAGCTGGCAGCACAGCAAGCAGCAGCATTGAAGTTAAGGAGACCGGTGATCAGAGGGCCGTCAGAGGCCGGTGGAGGGACTACGTGTACAGTGGCAAGGCCTCCGTCGATGGTGGGCCTGTCACCGAGCCAAATTCAAGCTATAAATGAGTCACCATTGGATTCACCAAAGATGTGGATGCAAATGGCTGCTGAAGCTGAAGTAATGCTAGGGTTTGATGGATGGTCTAATGATGAAGACGATGATGATATATTAGGGTTCAGTGAATTAGAAGAAACGCAGCATTATGAATCCATTTGGGACTTCTAA 573 0.5428 MEPLATANATTPPTFRGVRMRKWGKWVSEIREPGKKTRIWLGSYDTPEMAAAAYDVAALHFRGQAARLNFPELIGSLPRPASSRPEDVQLAAQQAAALKLRRPVIRGPSEAGGGTTCTVARPPSMVGLSPSQIQAINESPLDSPKMWMQMAAEAEVMLGFDGWSNDEDDDDILGFSELEETQHYESIWDF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2474 190 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Lele06g2474 190 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Lele06g2474 190 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
Lele06g2474 190 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Lele06g2474 190 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Lele06g2474 190 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Lele06g2474 190 FunFam Ethylene-responsive transcription factor 2 14 72 - -
Lele06g2474 190 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Lele06g2474 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 131 - -
Lele06g2474 190 SUPERFAMILY DNA-binding domain 14 72 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2474 Lele-ChrLele06 32558661 32559233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2474 12 149 AP2-EREBP Transcription Factor Family AT1G71450 56.522 8.37e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele06g2474 AP2 1.2e-13 CL0081