Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2443 ATGTGCAGCTACAGCGGCCACATAGTCCCTCGTCCTCCTGGACCCAATAAGTCCTTCTGCTACGTCGGCGGCGACACCCGCATCGTCTCCGTCGACCGCCGCACCATCACCACCCTCAACTTGCTTGTCTCGCACCTCTCCACCACCCTCTCCGTAAGCTTCTCCTTCACTTTAAAGTACCAGCTTCCCCATCTCGACCTTAACTCTCTCATTTCTCTCACCTCCGATGAAGATTTCCAAATCCTCATTGACGAGTACGATCGCCTCTGTTCCACTCCTCCTCCTTCCTCTGCACCCTCCCGCATCAGAGTATTCCTCTTCCCTACATATGCGGTTCAGGGTTCCGGGCGGCCAGTGATTCGGCACCCTAAAACTGAGTCTTGGTTCTTCGATGCGCTCAAGAGCGCTAAGATCCATCATGGGTTTGGGTTTTTTTATGGGTCGGGTGTGGAGGCTCATGGGTTTGTGTCTTCGGGTCCGGAGACTATGGTTTTGGAGAGGAGTTCGTCTTTTGGGTCAACTTCGTCATCTTCGGCTTCGTTGACCAATTTGGCTTTCAAGTCTCAGAGTAATGACGATAACGAGTTTGTTTTGCAGGATAGTAAAGCTAAGTTGGTGCAGACCAACACTGTTCCAAGTGATCATTGTGCTCCAAACGTTGTGCCCCACCATCACCAGAACATATCATACCAAGACCCCATTATTGTTCAAGCTTCTTCTTCAATGGAGTCTAGAGCAGGTTACAGCACTGAAACCATTATTATATCAGAAACCGCAAATAGCACCAACATGATGGAAATGGGGTGTAACACTTCATCATTTCCACACCAGAATCAACAAGTTCAGAGACAACATGTACCATTACAACATATGACATATCGTCATCAACCTAATCATGCATACCCAATATACCTCGTACCTGCTTATGCTCAAATACCACCCACCAACAGTTTGCCTATTATAACAACTTCCAATCATTCTTCTTTCATGGCTTCTCAGAATTATCATTATGATAGACCATCGAGTTCAGCCGCCGCCACCACCATGACATCATCATATGGAAATAGGCGACAAGCAGAATTCATTGATGTTGCTCCAATGTATGTTCATCAATCTCAGAATAATGTTGCTGTCACTAACACAGAATCTCCTGAGCATGGTGGTGGTGATCTTGATCATGCTCTGATTTACAAATCTCAGCCTCCTCCTCCATCATTGCCGAGTTCTTAG 1230 0.4691 MCSYSGHIVPRPPGPNKSFCYVGGDTRIVSVDRRTITTLNLLVSHLSTTLSVSFSFTLKYQLPHLDLNSLISLTSDEDFQILIDEYDRLCSTPPPSSAPSRIRVFLFPTYAVQGSGRPVIRHPKTESWFFDALKSAKIHHGFGFFYGSGVEAHGFVSSGPETMVLERSSSFGSTSSSSASLTNLAFKSQSNDDNEFVLQDSKAKLVQTNTVPSDHCAPNVVPHHHQNISYQDPIIVQASSSMESRAGYSTETIIISETANSTNMMEMGCNTSSFPHQNQQVQRQHVPLQHMTYRHQPNHAYPIYLVPAYAQIPPTNSLPIITTSNHSSFMASQNYHYDRPSSSAAATTMTSSYGNRRQAEFIDVAPMYVHQSQNNVAVTNTESPEHGGGDLDHALIYKSQPPPPSLPSS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2443 409 Pfam PB1 domain 18 108 IPR000270 GO:0005515
Lele06g2443 409 PANTHER OS05G0427100 PROTEIN-RELATED 1 327 - -
Lele06g2443 409 CDD PB1_UP2 1 107 - -
Lele06g2443 409 MobiDBLite consensus disorder prediction 379 409 - -
Lele06g2443 409 SUPERFAMILY CAD & PB1 domains 18 109 - -
Lele06g2443 409 SMART PB1_new 14 109 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2443 Lele-ChrLele06 32125207 32127232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2443 1 135 MAP Kinase Kinase Kinase AT5G57610 35.971 9.21e-16 77.8