Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2433 ATGCATCTCTCTAGTTTGCAAAACAACTGCGAAAAAGATTACAACGCTCTTGTGTTCATTGAACTAGTTCCTGATACATGCATCGGAGGAAGACGGAGGAGATATGATGGCCAGCGGGCCCAGATTGACAAATTAAGTGATGGATCGATTCGTGTTTTCTCAAGAAATGGAGACGAAACAGCATCAAGATTTCCAGATTTGATTGACTTAATCAAGGAATTCTGCAAGCCTGCTTCAGTGACTTTTACACTGGATGCAGTAATTGTGGGTATTGATAGGAAAATGGATATAGGTATATGGCTTCGCAAGAGTTATCTTCACGTGGGAGAGGAAGTAAAGATGCCTCAGTTACTACAGAGAGCATGA 366 0.4153 MHLSSLQNNCEKDYNALVFIELVPDTCIGGRRRRYDGQRAQIDKLSDGSIRVFSRNGDETASRFPDLIDLIKEFCKPASVTFTLDAVIVGIDRKMDIGIWLRKSYLHVGEEVKMPQLLQRA 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2433 121 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 35 94 - -
Lele06g2433 121 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 34 96 - -
Lele06g2433 121 Gene3D DNA ligase/mRNA capping enzyme 37 95 - -
Lele06g2433 121 Pfam ATP dependent DNA ligase domain 34 95 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2433 Lele-ChrLele06 32036250 32038179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2433 34 107 Core DNA Replication Machinery Family AT1G49250 31.081 1.90e-10 55.1