Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2399 ATGGCAACATGTTCGCCAGGAAAATTTCTGATTCTTCCCAGGAATTCTCATCTATCAGCCATATCTGCTATGGTATTGTCAGGTGCACTGCCTAAGTACATCATCCCTGAATATAATAATGATTGGGACATTGCTGGCGGTGTCTACCCATGCCAGTGGGTTTGGTGTTATACAGTGAGATTTCTGAGCTGTCATTCTCGTAAAATTCCTCTGATTGTTGATGAAGCTCATGGTGCACATCTAGGGTTTCATTCTAAATTGCCTAAATCAGCTCTCCAGCAAGGGGCTGATCTGTCTGTACAGTCCACTCACAAAGTTCTTTGCTCTCTTACTCAGTCATCTATGTTACATATGTTGGGTAATATTGTAGATAAGGAAAGAATTTCTCAGTGCCTCCAAACTCTTCAAGCCACAAGCCCTAGTTATCTACTGTTGGCTTCCCTAGATGCTGCAGGAGCTCAACTTAATGAAAGTCCTGATACTGTTTTCAATCAAGCAATTGATTTAGCCTTCGAATCACGATACCAACTAAAAGACATCCCAGGAATCCCAGTGCTTGAGAATTCAAGCTTTCCATTATTTCCAGCTATTGAAACATTGCGGCTCACTATTGGTTTTGGGCAGTTTGGTTTATCTGGTTATGAGGCAGATGAAATCTTATACCGGGATCATGGAATTGTCTGTGACCTTGTTGATATCCAATCTGTACCTGTACTGATACCTGGTGAAGTTATTACTGAAAAAGCCATCAATTATCTGTTGCATGCTAGAAGTAAAGGCGCTATAATTACTGGAGCCTCTGACCCTTCAATTTCTTCTATAGTTGATGAGAATTCAAGTAATAAGAACGGGGGATGCGAATGGTCATGTGAATGGGTTAATATGTGGTACAAAGATTATGGGAAACATGTGAATGGGGAGTTTTCAATGGCAGTAATTCAGGCAAATAATTTGTTGGAGGATCAAAGCCAGCTTGAATCTGGTTCTCTGAGTTCCTTTGAAGATGATGGCCCTCAAGGTACTTTCGTTGGGATTTATGATGGCCATGGTGGTCCTGTAGCTGCTCTTTGTTAA 1074 0.4125 MATCSPGKFLILPRNSHLSAISAMVLSGALPKYIIPEYNNDWDIAGGVYPCQWVWCYTVRFLSCHSRKIPLIVDEAHGAHLGFHSKLPKSALQQGADLSVQSTHKVLCSLTQSSMLHMLGNIVDKERISQCLQTLQATSPSYLLLASLDAAGAQLNESPDTVFNQAIDLAFESRYQLKDIPGIPVLENSSFPLFPAIETLRLTIGFGQFGLSGYEADEILYRDHGIVCDLVDIQSVPVLIPGEVITEKAINYLLHARSKGAIITGASDPSISSIVDENSSNKNGGCEWSCEWVNMWYKDYGKHVNGEFSMAVIQANNLLEDQSQLESGSLSSFEDDGPQGTFVGIYDGHGGPVAALC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2399 357 Gene3D - 56 161 IPR015421 GO:0003824
Lele06g2399 357 PANTHER ARGININE DECARBOXYLASE 1 52 - -
Lele06g2399 357 Gene3D - 1 55 IPR015421 GO:0003824
Lele06g2399 357 Gene3D Molybdopterin biosynthesis moea protein, domain 2 235 271 - -
Lele06g2399 357 ProSitePatterns PPM-type phosphatase domain signature. 342 350 IPR000222 GO:0043169
Lele06g2399 357 Pfam Orn/Lys/Arg decarboxylase, major domain 1 50 IPR000310 GO:0003824
Lele06g2399 357 Pfam Orn/Lys/Arg decarboxylase, major domain 65 178 IPR000310 GO:0003824
Lele06g2399 357 SUPERFAMILY Ornithine decarboxylase C-terminal domain 236 280 IPR036633 GO:0003824
Lele06g2399 357 SUPERFAMILY PLP-dependent transferases 1 242 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2399 Lele-ChrLele06 31724433 31727876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2399 269 355 PP2C-type Phosphatase Gene Family AT3G12620 59.770 5.15e-25 102