Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2394 ATGTTGTCTTGTGGAGGAGAAAATGATAATACGGCGTCGTGTTTTAGTCTGGTTGAGCGTAAGGATCCACCACGTGCCGCCATCGGGACTGTGTTGCCAACCCTTGGACAGTTTTTGAATTATTACGGTGATGTACGGAAGGAAGAATCAGGTGATGGTGGCGATACGCCGGTGCATCACCGCACGCTTGATATGACCGACGTCGGACTCGAGCGGCGCTCCGTGCCATTCGTTCTCTCGTTCGATAATCTCACTTACAGTGTGAAGGTTCGCCAGAAAATGAGCTTCTCAATGCTTTATCCGAAGTTGAAGGCAACAGCGGCCACGGCTGACGATGGAACTAAGACTCTGCTGAATGATATCTCCGGCGAGGCACGCGACGGAGAGATACTAGCCGTTATGGGAGCTAGTGGGTCAGGGAAATCAACTCTGATCGACGCCTTGGCCAACCGAATTGCTAAGGGAAGCTTGAAAGGAAAAGTGGCGTTGAACGGCGAGGCCTTAGAATCACGGCTTCTGAAAGTGATATCAGCTTATGTAATGCAAGATGATCTTCTCTTTCCGATGCTTACAGTGGAAGAAACTCTGACGTTCGCCGCCGATTTCCGATTACCTCGCACGCTCTCAAGATCCAAGAAGAAGATGCGAGTACAAGCTCTCATCGACCAGCTCGGTCTCAGAAACGCCGCGAAAACTGTCATCGGAGATGAAGGACACCGTGGAGTTTCCGGCGGCGAACGACGCCGTGTTTCCATCGGCATTGACATAATCCACGACCCAATCATCTTGTTCCTCGACGAGCCAACCTCAGGGCTCGATTCAACAAGCGCATACATGGTGGTTAAGGTTTTACAGAGAATCGCCCACACCGGAAGCATCGTGATCATGTCCGTACACCAACCCAGCTCAAGAATCCTTGGACTCCTTGATAGAATGATCTTCTTGTCTCGTGGACAAACAGTGTTCAGTGGCTCACCATTGCAACTTCCGATCTTCTTCTCTGAATTCGGCCACCCAATACCTGAAAACGAGAACCGAACAGAATTCGCACTTGACCTTATTCGCGAGCTCGAATCTTCACCTGGTGGAACAAAAAGCCTGGTGGAGTTCAACAAATCGTGGCAGAGCATCATGAATCATCCAGGAATCCGACCCGATAAGATTAATCGGAACGATTTATCTCTGAAAGAAGCCATTACTGCGAGCATTTCAAGAGGAAAGCTAGTGTCAGGTGCGACGACGACGACGACAAACACCAGCAACAACAACAACGTAAGCCCAACTTCGATGGTTCCAACGTTTGCGAATCCATTCTGGGTTGAAATTTTAAAACTCTCGAAAAGATCATTTACGAATTCTCGAAGAATGCCGGAGCTTTTTGGGATTCGATTGGCTGCGATTTTAGTAACTGGGTTTATTCTCGCCACCATGTTCTGGCAGTTAGATAACTCTCCAAAAGGGGTTCAAGAAAGACTCGGCTTTTTCGCTTTCGCCATGTCCACCACCTTCTACACCACCGCCGACGCACTTCCGGTGTTCCTCCAAGAACGATACATCTTCATGAGAGAAACCGCTCACAACGCTTACCGGCGATCATCATATCTCATATCTCACTCTCTGGTATCACTCCCTACATTGCTTATCCTCTCATTAGCTTTCGCCGCCACGACGTTTTGGGCCGTCGGCCTCGACGGAGGATTACCAGGTTTCTTCTTCTACTTCCTCGTCATCTTCGCTTCATTCTGGGCCGGAAACTCCTTCGTCACCTTCCTCTCCGGCGTAGTTCCACACGTGATGTTAGGCTACACAATAGTGGTAGCAATCTTAGCATATTTCTTACTATTCAGTGGATTCTTCATAAACAGAGACAGAATCCCAAGTTACTGGATTTGGTTTCATTACTTATCTCTGGTGAAGTATCCATATGAAGCTGTTCTTCAGAACGAGTTTGATGATCCAGTGAAGTGTTTCGTAAGAGGGGTTCAGATTTTTGATAATACACCACTTGGGGTTGTTCCTGGTCCAACAAAATTGAAACTTTTAGAGGATTTGAGTAATACTTTGGGGATGAACATAACGAGTTCAACGTGCTTGACGACTGGTTATGATATTTTGCAGCAAAATGGGATAACTCAGTTGAGTAAGTGGAATTGCTTGTGGGTGACAGTGGCATGGGGATTCTTGTTTAGGACTCTGTTTTATTGCTCTTTGTTGTTGGGAAGTAAGAACAAGAGAAGGTGA 2241 0.4739 MLSCGGENDNTASCFSLVERKDPPRAAIGTVLPTLGQFLNYYGDVRKEESGDGGDTPVHHRTLDMTDVGLERRSVPFVLSFDNLTYSVKVRQKMSFSMLYPKLKATAATADDGTKTLLNDISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGKVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLTFAADFRLPRTLSRSKKKMRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAHTGSIVIMSVHQPSSRILGLLDRMIFLSRGQTVFSGSPLQLPIFFSEFGHPIPENENRTEFALDLIRELESSPGGTKSLVEFNKSWQSIMNHPGIRPDKINRNDLSLKEAITASISRGKLVSGATTTTTNTSNNNNVSPTSMVPTFANPFWVEILKLSKRSFTNSRRMPELFGIRLAAILVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAHNAYRRSSYLISHSLVSLPTLLILSLAFAATTFWAVGLDGGLPGFFFYFLVIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLGVVPGPTKLKLLEDLSNTLGMNITSSTCLTTGYDILQQNGITQLSKWNCLWVTVAWGFLFRTLFYCSLLLGSKNKRR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2394 746 Pfam ABC-2 type transporter 442 650 IPR013525 GO:0016020|GO:0140359
Lele06g2394 746 ProSitePatterns ABC transporters family signature. 242 256 IPR017871 GO:0005524|GO:0016887
Lele06g2394 746 Gene3D - 102 331 IPR027417 -
Lele06g2394 746 SMART AAA_5 127 319 IPR003593 -
Lele06g2394 746 Pfam ABC transporter 118 270 IPR003439 GO:0005524
Lele06g2394 746 FunFam ABC transporter G family member 6 107 333 - -
Lele06g2394 746 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 62 733 - -
Lele06g2394 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 329 IPR027417 -
Lele06g2394 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 103 342 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2394 Lele-ChrLele06 31698253 31700493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2394 117 303 Calmodulin-binding Proteins AT2G36910 30.000 4.94e-12 67.8