Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2386 ATGGAAATCGAGAATTACACCGATGCTTCTCGGCCATCGCCAAAGAATGTATACAAAGATCCAGATGATGGCCGGCAGCGATTTTTGCTTGAGTTGGAGTTTGTTCAATGCCTTGCTAATCCCACCTACATTCACTATTTGGCTCAGAATCGATATTTTGAAGATGAAGCGTTCATTGGATACTTGAAGTACCTTCAATATTGGCAACGTCCTGAGTACATCAAATATATTATGTATCCTCATTGCCTCTTCTTTCTTGAACTTCTTCAGAATGCAAATTTCCGAAATGCAATGGCGCATCCTAGCAATAAGGAACTTGCACATAGACAACAATTTTACTACTGGAAGAACTATAGGAACAATAGGTTGAAGCACATTTTACCAAGGTCACTCCCTGAATCTAGCGCCACACCCGCTCCTCCCGCGGTTGCCTCAACTCCATCTCAGCCACCAGTGCCTGCTCTGCCCTCAGTACCAGCTGCAAATGTTCCAACCACAGTATCATCTGCTCAGGCTCATTCTCCAATGTCATATGGTATGCCGCCTGGACCTGCCCTTCCGAAAAGTGATATGAGGAATCCTGCGCTTGATAGGAGGAAAAGAAAGTAA 609 0.445 MEIENYTDASRPSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKYIMYPHCLFFLELLQNANFRNAMAHPSNKELAHRQQFYYWKNYRNNRLKHILPRSLPESSATPAPPAVASTPSQPPVPALPSVPAANVPTTVSSAQAHSPMSYGMPPGPALPKSDMRNPALDRRKRK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2386 202 MobiDBLite consensus disorder prediction 161 175 - -
Lele06g2386 202 MobiDBLite consensus disorder prediction 143 158 - -
Lele06g2386 202 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 12 202 IPR008831 GO:0003712|GO:0006355|GO:0016592
Lele06g2386 202 MobiDBLite consensus disorder prediction 131 202 - -
Lele06g2386 202 MobiDBLite consensus disorder prediction 1 20 - -
Lele06g2386 202 FunFam Mediator of RNA polymerase II transcription subunit 31 14 115 - -
Lele06g2386 202 Pfam SOH1 26 118 IPR008831 GO:0003712|GO:0006355|GO:0016592
Lele06g2386 202 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 13 115 IPR038089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2386 Lele-ChrLele06 31605005 31607268 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Lele06g2386 Med31 3.6e-35 No_clan