Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2333 ATGGCTCGGTCCTCGAGAGGTCAGCCAGAAGAATTGGAAGACGACGACGAAGATCACCTGACTGGAAATGGCTCTTCTTCACACAAAGTGAAGGTGGATGAAGCGACTAGAGAGCAGCGGGTTAACGCGCATCGTTCTAAGCATTCAGAAACTGAGCAGCGTAGAAGGAGCAAGATAAATGAAAGATTTCAGATTCTGAGAGATCTCATTCCTCAAAATGATCAAAAAAAGGATAAGGCTTCTTTCTTGTTGGAGGTTATTGAGTATATTCAATTTTTACATGAGAAATTACAAACGTATGAGCAATCTTACCAAGGGTGGAATCAGGAGCCAATGAAATTAATTCCTTGGAGAAATCATCGTGGACCTACAGATAATGTCACATCTCAGGCTATGCAAAATGGTTCTGGTCATGAGAACAATGATGTCGTCTCTCCGTTGCTACCCTTAAATGCACAGAATACAATTGAATCTGACTTGTCATCAACAATTATCCATAAGGCTAGCACCCCTGGTTTACCTTATGATGCTGTTCCCTTGGGTATGCAAATGCGGTTGGACATGTTTGATCTGACTGTGAGCAGTGGCATTCCAACCCAACATTTACATGAAGCAATATCTAACACCGAGAACATACCTTCCCATACTCAGCCTCAGGTGTGTCTTGGCGAACCTAAGGAGGGTGCATGTGATTTTCCAAATACTACATTGAAGGAACAGGACAATCTGACATTTGAAAGCGAATCAGTTAGCATCTCAAGAGCCTATTCTCAGGGAATATTGGATACTTTTGTACAATCATTGCGGTCTTCAGGTGTGGATTTATCTGAAGGCAATGTTTCAGTACAAATTGATGTAGGGAGACGATCAATGGCGTCCACATCTAGCTCAAAGGATCATGAGAACCAATTTGTGAACACCCCGTCAGTGCCATGTTCAGGAGTGGACTACTACAGCGAGGATTCTGAACAAGCTCTTAAGAGGCTCAGAACAGAAGAGAGTTAG 1005 0.4279 MARSSRGQPEELEDDDEDHLTGNGSSSHKVKVDEATREQRVNAHRSKHSETEQRRRSKINERFQILRDLIPQNDQKKDKASFLLEVIEYIQFLHEKLQTYEQSYQGWNQEPMKLIPWRNHRGPTDNVTSQAMQNGSGHENNDVVSPLLPLNAQNTIESDLSSTIIHKASTPGLPYDAVPLGMQMRLDMFDLTVSSGIPTQHLHEAISNTENIPSHTQPQVCLGEPKEGACDFPNTTLKEQDNLTFESESVSISRAYSQGILDTFVQSLRSSGVDLSEGNVSVQIDVGRRSMASTSSSKDHENQFVNTPSVPCSGVDYYSEDSEQALKRLRTEES 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2333 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 93 IPR011598 GO:0046983
Lele06g2333 334 MobiDBLite consensus disorder prediction 1 56 - -
Lele06g2333 334 Pfam Helix-loop-helix DNA-binding domain 45 93 IPR011598 GO:0046983
Lele06g2333 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 120 IPR036638 GO:0046983
Lele06g2333 334 MobiDBLite consensus disorder prediction 292 317 - -
Lele06g2333 334 Coils Coil 90 110 - -
Lele06g2333 334 MobiDBLite consensus disorder prediction 292 313 - -
Lele06g2333 334 SMART finulus 49 99 IPR011598 GO:0046983
Lele06g2333 334 MobiDBLite consensus disorder prediction 19 56 - -
Lele06g2333 334 Gene3D - 41 114 IPR036638 GO:0046983
Lele06g2333 334 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 3 332 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lele06g2333 334 CDD bHLH_AtBIM_like 42 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2333 Lele-ChrLele06 30913749 30918540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2333 3 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 38.816 1.88e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele06g2333 HLH 8.8e-15 No_clan