Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2325 ATGGCAGTGTCTTGTTTCTTCTTGTTTCAGTTGTTTATGGCCATTATCTCTTTCTCTGCCATGGCTTCTTTTGGCTGTGATGGAAGATGGCATGATGCTCATGCAACCTTCCACGGCGACATGTCTGGAGGTGAAGCCATGCATAAGTGCCTGCGTACATAAGGAGCTTGTGGTTATGGAGACCTCTTCAAGCCAGGATATGGCCTCGAAACGGCAGCTCTAAGCACAGCTCTGTTCAATAATGGCCTCACGTGCGGGGCATGCTTTGAGCTCAAGTGCGTCAACGACCAGCAGGGGTGCTTCTCCGACGCCGGAACCATCAAGATCACCGCCACCGACTTCTGTCCACCCAACCACACTCCTCCGGACGTCAACCACTGGTGCAACCCTCCCAATGAGCACTTCGACCCCTCCATGCCCATGTTCACGAAGTTCGTCCGCTACAAAGCTGGCATCATCCCACCTCAGGATGAATCTAGTGGGACAAAGCTTATCGTTTCAGATTACTACAAGTGA 516 0.5194 MAVSCFFLFQLFMAIISFSAMASFGCDGRWHDAHATFHGDMSGGEAMHKCLRTXGACGYGDLFKPGYGLETAALSTALFNNGLTCGACFELKCVNDQQGCFSDAGTIKITATDFCPPNHTPPDVNHWCNPPNEHFDPSMPMFTKFVRYKAGIIPPQDESSGTKLIVSDYYK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2325 171 SMART dpbb_1 71 157 IPR007112 -
Lele06g2325 171 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 54 154 IPR007112 -
Lele06g2325 171 PANTHER EXPANSIN-A15 8 154 IPR002963 GO:0009664
Lele06g2325 171 PRINTS Expansin signature 93 104 IPR002963 GO:0009664
Lele06g2325 171 PRINTS Expansin signature 107 117 IPR002963 GO:0009664
Lele06g2325 171 PRINTS Expansin signature 125 142 IPR002963 GO:0009664
Lele06g2325 171 PRINTS Expansin signature 66 80 IPR002963 GO:0009664
Lele06g2325 171 PRINTS Expansin signature 142 155 IPR002963 GO:0009664
Lele06g2325 171 SUPERFAMILY Barwin-like endoglucanases 29 154 IPR036908 -
Lele06g2325 171 Pfam Lytic transglycolase 71 154 IPR009009 -
Lele06g2325 171 Gene3D - 15 156 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2325 Lele-ChrLele06 30786837 30788280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2325 25 154 Expansin Gene Family AT5G39280 60.000 6.34e-52 165