Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2319 ATGGCCGCCACAAAAGCAGCAACAAGAAGCGCCACCATTGTGGTGGCCGCTTTCATGGCCGCTCTCATTGCCGGCACCACCACGACGGTCCTCTGCGACGACATGACGCCAGTTCCAGGCGACAAGTCCCAACTTACGAAATGGTTCAACGACAACGTGAAGCCATTGTCGTCGCAGCTTCGAGGGAATAATAACAAGAAGGGCGTAAGAATTAACCCTAAACTTGCAGCTGCAGAGAAACAAGTAAAGGTGGTGAAAGTGATGAAAGATAGAAGAGGAGACTTCAAGACGGTGACGGAGGCCATTAAAAGCATACCTGAAGGTAACCAGAGGAGAGTGATAGTGTATATTGGGAGTGGGAATTACTTTGAGAAGATAAGGATAGAGAAGACGAAGCCATTTGTGACTCTGTTTGGTGATCCTAAGAATTTGCCAAACTTGACCTTCGATGGAACTGCACGCAAATATGGAACTGTGGATAGTGCTTCCTTGATTGTTGAATCAGATTACTTCGTTGCCGTCAATCTCATTATTTCGAATAATGCACCAATGCCGGATGGGAGGATGGCAGGGGCTCAGGCAGTGGCGTTGAGGATTTCCGGCAACTACGCCGCGTTCCACCATTGCACATTCTTGGGATTTCAGGACACCATTTGTGACGACAGGGGGAAACATTTCTTTAAAGATTGCTACATTCAGGGCACCATGGATTTCATATTTGGAAGCGGAAAATCTCTCTATCTGAACACAAAATTGGTGGTTGTTGGGAAGACGGGAGGGGTGATAGCAGCGCCGGCAAGGAAGAACCAATTGGACGACACGTGTGGATATTCGTTTGTGCATTGTGAGATAAGGGGGACGGGGAATGGCACGCACCTGGCGAGAGCGTGGATGTCACATCCCAAAGTGGTATACGCTTACACATCCATGAGCTCTATTATCCACCCTCTTGGTTGGCAAGATGGCCCTCAAGGCTCTCCCAAGACAGTGTATTATGGAGAGTACAAGAACAAAGGAATAGGTGCAAGCAGGAGAGGAAGAGCCAAGTTCACAAAGTGGCTTAGTGACTCAGAGGCTTTGCCTTTCATCACTCTTGCCTACATTGATGCCTCCAAGTGGCTGCTTCCTCCCCCAAAACTTCACTAG 1146 0.4852 MAATKAATRSATIVVAAFMAALIAGTTTTVLCDDMTPVPGDKSQLTKWFNDNVKPLSSQLRGNNNKKGVRINPKLAAAEKQVKVVKVMKDRRGDFKTVTEAIKSIPEGNQRRVIVYIGSGNYFEKIRIEKTKPFVTLFGDPKNLPNLTFDGTARKYGTVDSASLIVESDYFVAVNLIISNNAPMPDGRMAGAQAVALRISGNYAAFHHCTFLGFQDTICDDRGKHFFKDCYIQGTMDFIFGSGKSLYLNTKLVVVGKTGGVIAAPARKNQLDDTCGYSFVHCEIRGTGNGTHLARAWMSHPKVVYAYTSMSSIIHPLGWQDGPQGSPKTVYYGEYKNKGIGASRRGRAKFTKWLSDSEALPFITLAYIDASKWLLPPPKLH 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2319 381 SUPERFAMILY Pectin lyase-like 84 374 IPR011050 -
Lele06g2319 381 Gene3D - 79 376 IPR012334 -
Lele06g2319 381 FunFam Pectinesterase 80 376 - -
Lele06g2319 381 Pfam Pectinesterase 85 369 IPR000070 GO:0030599|GO:0042545
Lele06g2319 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 78 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2319 Lele-ChrLele06 30738837 30741412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2319 15 380 Carbohydrate Esterase AT1G69940 53.951 2.35e-143 409