Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2312 ATGGCCGCATTTCAGGTTTCTCCATTAACGGCTAGCCCTAACAGCAAGCCTATCAAAGAAGAAGTACAGAAACAGAAAGCTCCTCCTGCTGAGAATGGGCATTCAATTATCAAACCTACAATCTCTGAGTTCAGTGGCGTTCACACTGATGAAACGTTGGCTAATGTGATTGCTTGCTATGTCGACTCGCTAAAGCATCTAAAAGATATTTGCTATCCAACTAATCAAGACATAAACTACGAAGCATTGATGAAGTTAATTTGTCTTCCCTTAAACAATGCCGGTGATCCATTTACAGGGAGTAGCTACAAGCTTAATTCATTTAACTTTGAGCTGTGCGTATTAGATTGGTTTGCTAATCTTTGGGAAATTGAGAAGAATGAGTACTGGGGATATGTTACAAATGGTGGAACCGAAGGAAATCTTTATGGAATCTTAGTGGGGAGGGAACTTCATCCAGATGGAATTTTGTATACATCAAAAGAATCGCATTATTCACTGTTCAAGATAGCAATAATAGCTAGAGTCAAGTGTGTGGTAGTTGGGACCAAGCCCTCTGGTGAGATTGACTATGATGAACTAAAGGCTTCACTTCTTGCTTACCAGGACCTACCAGCCATCATCAACCTAAATCTGGGTACTCTCTTTCTCTATCAATCTATGTATAGAATCGGTTTCCATACTCATCATAGGGAAGGTACAACCATGAAAGGAGGTATTGATGACCTTGATGTCGTACTACAAATACTTGTGGACTGTGGCTTCAACCAAGATCGATTCTACATTCACTGTGATGCCGCTTTATTCGGATTTATGCTCCCATTTATTAACGGAGCACCAAAGATCTCTTTCAAGAAGCCTATTGGAAGTGTAACTGTTTCAGGCCATAAGTATCTTGGAAGCCCAATCCCATGTGGTGTTCTGATAACTCGTTTCAATTATGTTGACCTTCTCTCTAGAGATGTACAATGCCTAGCTTCGAGAGACACCACAATCTCAGGAAGCCGAGGAGGCCATGCTTCAATCTTCCTCTGGTATGCTCTCAACAAGAGAGGCTTCAATGGCCTTCAAAAAGATGTGAATGAATGCATCAACAAGGCGATCTATCTTCGAAATCGCCTGAGGGAACATGGCGTCGGCGTCATGCTCAATCAGTTTAGCAATATCGTCGTGTTCGAGAGGCCTTGTGATGATGCATTTGCTAGCAAGTGGATTTTAGCTAGCGAAGGAAAACTATCACACATAGTGGCCTTGCAACATGTGACCATGGAAGTTCTAGATTTGTTTGTGAGCGAGTTTGTGAAGAATCGAAAGATTTGGTATGAAGATTATGAAGGCAGCAAGAAAGTTCCCTGTATTGCAGAGGATATTGGTGCTAACAACTACTGTCTTGGTGACCTATTCATTCAGTCGCAATTGGAATAA 1425 0.4161 MAAFQVSPLTASPNSKPIKEEVQKQKAPPAENGHSIIKPTISEFSGVHTDETLANVIACYVDSLKHLKDICYPTNQDINYEALMKLICLPLNNAGDPFTGSSYKLNSFNFELCVLDWFANLWEIEKNEYWGYVTNGGTEGNLYGILVGRELHPDGILYTSKESHYSLFKIAIIARVKCVVVGTKPSGEIDYDELKASLLAYQDLPAIINLNLGTLFLYQSMYRIGFHTHHREGTTMKGGIDDLDVVLQILVDCGFNQDRFYIHCDAALFGFMLPFINGAPKISFKKPIGSVTVSGHKYLGSPIPCGVLITRFNYVDLLSRDVQCLASRDTTISGSRGGHASIFLWYALNKRGFNGLQKDVNECINKAIYLRNRLREHGVGVMLNQFSNIVVFERPCDDAFASKWILASEGKLSHIVALQHVTMEVLDLFVSEFVKNRKIWYEDYEGSKKVPCIAEDIGANNYCLGDLFIQSQLE 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2312 474 PANTHER - 232 462 - -
Lele06g2312 474 SUPERFAMILY PLP-dependent transferases 79 436 IPR015424 -
Lele06g2312 474 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 290 311 IPR021115 GO:0016831
Lele06g2312 474 MobiDBLite consensus disorder prediction 1 32 - -
Lele06g2312 474 Pfam Pyridoxal-dependent decarboxylase conserved domain 110 378 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele06g2312 474 Gene3D - 91 348 IPR015421 GO:0003824
Lele06g2312 474 Gene3D Aspartate Aminotransferase, domain 1 349 437 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2312 Lele-ChrLele06 30610785 30614925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2312 233 378 Calmodulin-binding Proteins AT2G02010 29.032 1.87e-08 54.7