Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2304 ATGTTGGATCTCAATGTCGATATGGAAGGTTCTCAGCTCCAAAGGGAAGAAGATTCTGGGACTTCCAACTCCTCTGTGCTGAATTTCGAAGAATCTCGAGACGAAGATTCTTCGGCCTTCGTGTTCGACATACTAAAGAGAGAAACAGATTGTCGGGTTGAGGATGAAGAGAAGGAGACGCCAGAAGAAATCACGACAAAGCCACTTTTCCCGATGAATAGTGAAGACAAGGGGCGCAGAGATTGTGATTTCCGATTGGGATTCTCATGTTCGAGAAGTAATCAATGGCTGAACCTTTCCTTCGCTGAGAGTGGTGCTGTTGGCACGCAAGGTGAATTGAGAGTGTTACAGCAAAAGCAACCCCAAACCAGGAAAAGCAGAAGAGGGCCCAGGTCTCGAAGCTCACAGTACAGGGGTGTTACTTTCTATCGCAGAACTGGTCGCTGGGAATCCCATATATGGGATTGTGGGAAGCAAGTCTATTTAGGTGGATTTGACACTGCACATACTGCAGCAAGAGCATATGATAGGGCTGCAATTAAGTTCAGAGGAGTTGAAGCTGATATAAACTTCAGTCTGAGTGATTATGAGGAAGACATGAAGATGATGAAAGGTTTGAGTAAAGAGGAGTTTGTCCAAGTCCTTCGCCGCCAGTGCTCTGGTATCCCGAGAGGGAGCTCAAAATATAGAGGCCTGTCTCTCAACAAATGGGGTCAATGGGAAGCACAAGCCAGCCCTTTCCTTGGCAAAAAGCTTTATGACAAGCTGCCCATCAAGAGTGATGGAATAGGATTGGTGACTAGTGTTGAGCCTAGCAAGGGAGAGAGAACTATTGAGTCAAGCAGAGGAGGGAATAATCAAAATCTTGATTTGAGCCTTGGAATTTCCCCACCTTGTAATGAATCTGAGAAGAATGACGCTGCGAGAGGCTTTTCTTTTCGTTATGCAGCTTGTGAGACACCTAACAAAGGAGGGCCAATGGCTGATGGCACTGGTGCTGCAATAATAAGGGGACAAGCCATTTATGGTGTGGCAATGCCATCTAAATATGACCAAATATGCTCTGGCTTATATCCTGGTTACGTACAGGATTATGAGGAGAAGGCCATAGAAAAAAGAAGTGAAGTTGTTCCTTTATCAAGATTCCCAAATCTGGCTTGGCAACTTCACAGCAACGGCAGCATCGCGCCGGTGCCAGTGTTTTCTAATGCAGCATCATCAAAATTCATGCCTTCAAGCAACAATGGTGGACCAGCCCCACATCCAATAATCAACCCTCTTAATAACAATTCCATCTACAATTTGTGCTTCAGTTCAACCCCAACATCCACACTTAATAACTCCCCAAGTTGCCAAAGTCTTAGTGGCTGA 1371 0.4544 MLDLNVDMEGSQLQREEDSGTSNSSVLNFEESRDEDSSAFVFDILKRETDCRVEDEEKETPEEITTKPLFPMNSEDKGRRDCDFRLGFSCSRSNQWLNLSFAESGAVGTQGELRVLQQKQPQTRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVEADINFSLSDYEEDMKMMKGLSKEEFVQVLRRQCSGIPRGSSKYRGLSLNKWGQWEAQASPFLGKKLYDKLPIKSDGIGLVTSVEPSKGERTIESSRGGNNQNLDLSLGISPPCNESEKNDAARGFSFRYAACETPNKGGPMADGTGAAIIRGQAIYGVAMPSKYDQICSGLYPGYVQDYEEKAIEKRSEVVPLSRFPNLAWQLHSNGSIAPVPVFSNAASSKFMPSSNNGGPAPHPIINPLNNNSIYNLCFSSTPTSTLNNSPSCQSLSG 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2304 456 SUPERFAMILY DNA-binding domain 135 193 IPR016177 GO:0003677
Lele06g2304 456 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
Lele06g2304 456 ProSiteProfiles AP2/ERF domain profile. 136 192 IPR001471 GO:0003700|GO:0006355
Lele06g2304 456 MobiDBLite consensus disorder prediction 271 290 - -
Lele06g2304 456 FunFam AP2-like ethylene-responsive transcription factor 135 194 - -
Lele06g2304 456 SMART rav1_2 136 198 IPR001471 GO:0003700|GO:0006355
Lele06g2304 456 Gene3D AP2/ERF domain 135 194 IPR036955 GO:0003700|GO:0006355
Lele06g2304 456 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 109 287 - -
Lele06g2304 456 CDD AP2 136 191 IPR001471 GO:0003700|GO:0006355
Lele06g2304 456 MobiDBLite consensus disorder prediction 52 74 - -
Lele06g2304 456 MobiDBLite consensus disorder prediction 116 136 - -
Lele06g2304 456 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2304 Lele-ChrLele06 30505165 30508600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2304 1 433 AP2-EREBP Transcription Factor Family AT5G60120 40.041 2.42e-68 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele06g2304 AP2 6.6e-10 CL0081