Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2263 ATGGAGACAAAGGTCTGGACTTCAGCAATTTTACGTTTGGTCGTGATAGTTTATTCATCATGGCTGATTTCTGCCAACATGGAAGGCGATGCTTTGCATAGCCTGAGGGCAAATTTACAGGATCCTAACAACGTGTTGTCAAGTTGGGATCCTACACTTGTCAATCCATGCACATGGTTTCATGTAACTTGCAACAACGATAATAGTGTTATAAGAGTTGATCTAGGAAATGCTGCTTTGTCTGGTCAACTTGTTCCACAGCTAGGCCAGCTCAAAAACTTGCAGTATTTGGAACTTTACAGCAATAACATTACTGGCCCAATTCCAAGTGACCTGGGTAATCTTACTAACTTGGTGAGCTTGGATCTGTACTTAAACAGTTTCTCTGGTCCTATCCCAGATTCATTGGGCAAGTTGTCAAAATTGCGTTTCCTCCGGCTTAACAATAACAGCCTGACGGGTCCAATTCCTATGTCATTGACTAATATTTCATCTCTCCAAGTCCTGGATTTATCAAACAACCATCTGTCTGGTGTGGTTCCTGTTAATGGCTCCTTCTCGTTATTCACTCCAATCAGTTTTGCTAACAACTTGGGTTTATGTGGGCCAGTCACTGGGCATCCTTGTCCAGGATCTCCACCATTTTCTCCTCCTCCCCCTTTTGTCCCACCACCCCCAACTTCTCTCCCAGGGGACGGTAGTGCCACTGGGGCAATTGCTGGGGGAGTTGCTGCTGGTGCTGCCCTGTTATTTGCTGCACCTGCAATTGCATTTGCATGGTGGCGACGAAGGAAACCACAGGAGTTTTTCTTTGATGTGCCCGCTGAAGAGGATCCTGAAGTTCATTTGGGACAGCTCAAGAGGTTTTCACTACGAGAACTGCAAGTTGCAACAGATAGTTTCAGCAATAAGAATATACTTGGAAGGGGTGGATTTGGTAAGGTATATAAGGGACGCTTGGCAGATGGTTCACTGGTTGCTGTGAAAAGACTGAAAGAGGAGCGCACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAAATGATCAGCATGGCTGTGCATCGTAATCTTCTCCGTTTACGTGGGTTCTGTATGACACCTACCGAGAGGCTTCTTGTTTATCCCTATATGGCAAATGGAAGCGTTGCATCATGCTTAAGAGAGCGTCCAGCAAATCAACCACCTCTAGATTGGCCAACAAGGAAGCGAATTGCTTTGGGATCTGCCAGGGGCCTTTCATATTTGCATGATCATTGTGACCCAAAGATTATACATCGTGATGTTAAAGCAGCAAACATATTGTTGGATGAGGAGTTTGAGGCTGTTGTTGGTGACTTTGGGTTGGCAAAGCTTATGGATTACAAGGACACCCATGTTACAACTGCCGTACGGGGCACGATTGGGCACATAGCTCCCGAGTACCTGTCAACTGGGAAGTCTTCGGAGAAAACTGACGTTTTTGGGTATGGTATCATGCTTCTGGAACTCATAACTGGACAAAGAGCATTTGACCTTGCTCGACTTGCAAATGATGACGATGTCATGTTGCTTGATTGGGTAAAAAGCCTTCTCAAAGAGAAGAAGCTAGAAATGCTTGTTGATCCTGATCTACAGAACAACTATGTAGAGTCCGAGGTAGAACAGCTCATCCAGGTTGCGCTGCTCTGCACTCAAGGCTCGCCTATGGACCGACCTAAGATGTCAGAAGTGGTTAGAATGCTCGAAGGCGATGGCCTGGCAGAGAGATGGGATGAGTGGCAGAAGGTCGAAGTTCTCCGGCAGGAAGTGGAGCTGGCCCCTCATCCCAATTCCGATTGGATTGTCGACTCAACTGAGAATTTACATGCAGTTGAGTTATCAGGTCCTAGGTGA 1875 0.4629 METKVWTSAILRLVVIVYSSWLISANMEGDALHSLRANLQDPNNVLSSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNSFSGPIPDSLGKLSKLRFLRLNNNSLTGPIPMSLTNISSLQVLDLSNNHLSGVVPVNGSFSLFTPISFANNLGLCGPVTGHPCPGSPPFSPPPPFVPPPPTSLPGDGSATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPANQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKSLLKEKKLEMLVDPDLQNNYVESEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2263 624 Gene3D Transferase(Phosphotransferase) domain 1 378 595 - -
Lele06g2263 624 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Lele06g2263 624 FunFam Somatic embryogenesis receptor kinase 1 24 211 - -
Lele06g2263 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 586 - -
Lele06g2263 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Lele06g2263 624 ProSiteProfiles Protein kinase domain profile. 301 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2263 624 CDD STK_BAK1_like 307 578 - -
Lele06g2263 624 FunFam Somatic embryogenesis receptor-like kinase 1 378 595 - -
Lele06g2263 624 Pfam Protein kinase domain 302 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2263 624 FunFam Somatic embryogenesis receptor kinase 1 270 377 - -
Lele06g2263 624 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Lele06g2263 624 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Lele06g2263 624 ProSiteProfiles Leucine-rich repeat profile. 165 186 IPR001611 GO:0005515
Lele06g2263 624 SMART serkin_6 301 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2263 624 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Lele06g2263 624 SUPERFAMILY L domain-like 29 192 - -
Lele06g2263 624 Gene3D Ribonuclease Inhibitor 24 211 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2263 Lele-ChrLele06 29940417 29946167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2263 1 624 Receptor kinase-like Gene Family AT1G71830 88.640 0.0 1044
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele06g2263 Pkinase 9.6e-45 CL0016