Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2241 ATGACGGTGGTGTCGGATTCCTCTCCTGAGTCTTTCAGCCAGATGATGGCTTCTATGCCCGGGTTTCGATTCCATCCTACCGATGAGGAACTAATCATGTACTATCTGAAGAGGAAGATGTGTAGGAGAAGGCTGAAGCTCGATGTAATTCGTGAAACTGATGTCTACAAGTGGGATCCTGAGGAATTGCCTGGTATTTGCTCTACTCTTGGATTAATCTTTGTTTGCCTAGGCGTTGACTTTATCGGTGGGGGTTTGCGGGTCGTTAGGGTTTGGTTTATATTTTGTTTGATCGGGCAGTCAGTGCTCAAAACTGGAGATAGGCAATGAGGTAGAGCACCGCAGGGTAAGCGAACTGATTGGGTTATGCATGAGTACTCATTGGAAGAAGAAGAACTTGCAAGATGCCAGAATTGTAAGGACTATTATGCACTTTACAAGGTGTTTAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAACAATATGGTGCACCATTCGTAGAAGAAGAATGGGTAGATGATGACTTTGTAGATTTTAATGTTAATTCAGCTGGCAAGGAGGCTCTGATTTCACAAGTCGATGAGGGTACTTCTGTTGATACTGTGAGTTATAATGGTCAAGTGCCGCCATTGTTTGATGATGAACTTGATGAGATCTTGAAAAAAATGATGGATGAGCATGTTCCTGACCAGCCCCCGCTGTGTCCTGCTGTACCTCAGGTTGCTGCTGAAGAAACACAAAGTGTGGTGGTAGATCAAATTTATAAGGAGGTGACATTTGTGGAGCAAAACGAAATGTTTCATTCAAGCGGTCACTACCATGACCCTACCTTATCAGCTACTGCACACGTGCATGTTTCTGAAGGGCCTGAGGTCACTTCTGCTCCCAGTGTTCAAGTAGAGGAGCCTCTCTTTCATGAGGATGACTTCTTGGAAATGAATGATCTCATTGATCCTGAACCAGCATTGCCCAGAATAGAAAATCCTTTGGAGAACTTAGAGTTTGAAGATGGATTAAGTACGTTTGACTTGTACCATGATGCAGAGATGTTTCTCCGCGACATGGGGCACATTGACCAGGAAACTGTTTCACATCCTTATATGAATACCTTTGACAGTAATGTTGTGAATCAGAATTATCAGTCTCTGCCCCTTGGAGACAATGTAGATCAAAGTGGTGAACTCTGGATGTGTCATGAAAGGCACATCATGAGTCCAGCAGAACATCCTAATGTTTCTATCTCTTCATCGACCTCAGGTGTGAGTTATGAATCTGCCAGCTTGCCTGCTGAAGATAAGTTGCAAGTGATCAATGGGTTTTTGTTTGGGGAAGAAAAAAGTAGAGTTATCATATTTTTACCATCAGGGAATTCTTATTAG 1380 0.4304 MTVVSDSSPESFSQMMASMPGFRFHPTDEELIMYYLKRKMCRRRLKLDVIRETDVYKWDPEELPGICSTLGLIFVCLGVDFIGGGLRVVRVWFIFCLIGQSVLKTGDRQXGRAPQGKRTDWVMHEYSLEEEELARCQNCKDYYALYKVFKKSGPGPKNGEQYGAPFVEEEWVDDDFVDFNVNSAGKEALISQVDEGTSVDTVSYNGQVPPLFDDELDEILKKMMDEHVPDQPPLCPAVPQVAAEETQSVVVDQIYKEVTFVEQNEMFHSSGHYHDPTLSATAHVHVSEGPEVTSAPSVQVEEPLFHEDDFLEMNDLIDPEPALPRIENPLENLEFEDGLSTFDLYHDAEMFLRDMGHIDQETVSHPYMNTFDSNVVNQNYQSLPLGDNVDQSGELWMCHERHIMSPAEHPNVSISSSTSGVSYESASLPAEDKLQVINGFLFGEEKSRVIIFLPSGNSY 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2241 459 Gene3D NAC domain 105 154 IPR036093 GO:0003677|GO:0006355
Lele06g2241 459 Gene3D NAC domain 27 104 IPR036093 GO:0003677|GO:0006355
Lele06g2241 459 ProSiteProfiles NAC domain profile. 18 151 IPR003441 GO:0003677|GO:0006355
Lele06g2241 459 SUPERFAMILY NAC domain 14 151 IPR036093 GO:0003677|GO:0006355
Lele06g2241 459 Pfam No apical meristem (NAM) protein 20 108 IPR003441 GO:0003677|GO:0006355
Lele06g2241 459 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2241 Lele-ChrLele06 28925108 28929480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2241 4 439 NAC Transcription Factor Family AT1G34190 37.310 3.67e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele06g2241 NAM 1e-11 No_clan