Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2227 ATGCCGAAGGAGAATATAGAGGATAAGTATTTGTTGGATCGAGAGCTTGGTCGTGGGGAGTTTGGGATAACTTATCTGTGTATTGATCGAGAAACTAGGGACCTACTAGCTTGTAAGAGCATTTCGAAGCGGAAGCTTAGGACGGCAGTAGACGTTGAGGATGTGAGGCGTGAGGTGGCTATAATGAAGCACTTGCCTAAGAATTCCAGTATTGTGAGCTTGAAGGAGGCTCTTGAAGACGCAATGCCAAGCCTCAAATGTCATTTGCAGAAAGGTGAGAGGTTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAGGTTCTCAAGCGGAACTATGGGCCAGAAATAGATATATGGAGCGCAGGACTATTCTATATCAATGCTCGCATGCTTATGTCACAGTTCCAGTATGGCTCTAGATCCATGTAG 435 0.4483 MPKENIEDKYLLDRELGRGEFGITYLCIDRETRDLLACKSISKRKLRTAVDVEDVRREVAIMKHLPKNSSIVSLKEALEDAMPSLKCHLQKGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGLFYINARMLMSQFQYGSRSM 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2227 144 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Lele06g2227 144 Pfam Protein kinase domain 12 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2227 144 Pfam Protein kinase domain 88 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2227 144 Gene3D Transferase(Phosphotransferase) domain 1 82 143 - -
Lele06g2227 144 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Lele06g2227 144 SUPERFAMILY Protein kinase-like (PK-like) 8 126 IPR011009 -
Lele06g2227 144 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 80 - -
Lele06g2227 144 ProSiteProfiles Protein kinase domain profile. 10 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2227 144 SMART serkin_6 10 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2227 Lele-ChrLele06 28674629 28677708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2227 85 128 EF-hand Containing Proteins AT3G51850 77.778 7.67e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele06g2227 Pkinase 1.4e-10 CL0016