Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2200 ATGTCTGAGATATCGTCATGTCAAAAGGAAACAAATAAGTTGCTTATGGCAACCAAGGAAGGAGAGAACAAGCCATTTGATTTTTTACGTAGTGTATATGAGGGGTGCATTGCTGGAGGTGCTGCAGGCGTTGTTGTAGAAACAGCTTTGTATCCAATTGACACTATAAAAACTCGACTTCAGGCTGCCCGTGGTGGAGGTAAAATCATTTTGAAGGGTCTATATTCTGGATTGTCTGGAAATCTTGCTGGCGTCTTACCGGCCTCTGCGATTTTTGTTGGTGTATATGAACCCACAAAACTGAAACTGCTAGATGCCCTGCCCGAAAATCTCAGTGCTGTTGCTCATCTTGCTGCAGGTGCCATTGGTGGCTTGGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGAATGCAAATTGGACAGTTCAGTTCAGCTCCTGCTGCTGTCCGTCTCATTGTTTCCAAGCAGGGTTTCAAAGGTCTCTATGCGGGATATGGATCCTTCCTTTTGCGAGATTTGCCATTTGATGCCATACAATTTTGCATATATGAGCAGCTTCGGATAGGTTATAAGTTAGCGGCCAAAAGAGATCTGAAAGATCCAGAGAATGCTATGCTGGGTGCTTTTGCTGGAGCTGTAACTGGAGCAATTACAACTCCTCTGGATGTTGTAAAAACCAGATTGATGGTTCAGGGATCACAAAACCAGTACAAAGGCATTAGTGATTGTGTGAGAACAATAATCAAAGAAGAAGGAGCTCAAACTCTTTTCAAGGGTATGGGGCCTAGAGTTTTGTGGATAGGTATTGGAGGTTCAATTTTCTTTGGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAAAGGCAGCAGCAAAATGAGGTAGGGAGGTCAATTTCTTCTAGCCCCAAAAGAAGCTAA 930 0.4323 MSEISSCQKETNKLLMATKEGENKPFDFLRSVYEGCIAGGAAGVVVETALYPIDTIKTRLQAARGGGKIILKGLYSGLSGNLAGVLPASAIFVGVYEPTKLKLLDALPENLSAVAHLAAGAIGGLASSLVRVPTEVVKQRMQIGQFSSAPAAVRLIVSKQGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLKDPENAMLGAFAGAVTGAITTPLDVVKTRLMVQGSQNQYKGISDCVRTIIKEEGAQTLFKGMGPRVLWIGIGGSIFFGVLEKTKQILAQRQQQNEVGRSISSSPKRS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2200 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 102 IPR018108 -
Lele06g2200 309 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 6 296 - -
Lele06g2200 309 SUPERFAMILY Mitochondrial carrier 31 283 IPR023395 -
Lele06g2200 309 Pfam Mitochondrial carrier protein 31 103 IPR018108 -
Lele06g2200 309 Pfam Mitochondrial carrier protein 111 191 IPR018108 -
Lele06g2200 309 Pfam Mitochondrial carrier protein 206 291 IPR018108 -
Lele06g2200 309 PRINTS Mitochondrial carrier protein signature 48 62 IPR002067 GO:0055085
Lele06g2200 309 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Lele06g2200 309 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Lele06g2200 309 PRINTS Mitochondrial carrier protein signature 211 233 IPR002067 GO:0055085
Lele06g2200 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 288 IPR018108 -
Lele06g2200 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 193 IPR018108 -
Lele06g2200 309 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 34 300 - -
Lele06g2200 309 Gene3D Mitochondrial carrier domain 35 303 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2200 Lele-ChrLele06 27628291 27649189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2200 198 303 Chloroplast and Mitochondria Gene Families AT1G07030 28.037 7.44e-07 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2200 06 27628291 27649189 Lele08g2166 08 26655049 26663373 hybridization