Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2170 ATGGTTTCGGCGCTGACGCATGTGGTGTCAGGATCTGGTGGTCAGGGACGCACCGAATGGAACCCTGTGACCTCACCTCGTGGCCAGCCTTCCCCTTCTTCTTCAGTTTTGTCGCCATATTTGTCGTCTTCTTCTTCATCATCATCATCATCTTCCAATGCTTCAAGCTCTGTTTTGAGCTCTGCTTCCGGTTCTAACGCTTCCTGGGTTGGCCACAAACGAGCACGTGACCAACACAGCTCTGTCTATGGATCTTTCAGTGACTTCAGAGTTCCTTCTCAAGGGCAATCATCTTCAGGGGCAGAGGAGGGGACGAATGTGGCGGTCAGTGCGGTGGTGGAGACGGTGGCTGCGGTAACGGCTGAGGAAAGCGGAGAGAGGAGGAGGAGGTACAGAGGAGTGAGACAGAGGCCATGGGGGAAATGGGCGGCGGAAATTCGTGATCCTCACAAGGCGGCGAGAGTCTGGCTTGGTACATTCGATACGGCCGAAGCTGCCGCCAGAGCTTACGATGAAGCTGCATTGAGATTCCGAGGGAACAGAGCAAAATTGAATTTCCCTGAAAATGTCAGAGTTGTGCCCCCTGCCCACAACTTTCCGGCCACTCGACTCGCCGTATCAGATTCCCCGGTGACTTATTTCCAACACCAGACTACTAATCTTCCTCCTCCACTTCCTCCACCGCAGCCGCCGTTCTCTCAGTCACCATCTTTTCAGTCGCAATCAGATTTGATCAGAGATTATTGGGAATATTCTCAGCTTCTTCAGAGCTCCGATGAATTCCAACAACAGCAGCAACATCAGCAACAGGAACAACATTCGAATTTGCTACAACAATGGATCTATAATTCCCAATTGACGGCGCTTCAATCGTCTTCTTTGTTATTATCATCGTCACCTCTGTTTTCTTCTTCATCACCAACCGCATTCTCACCTTCCAGCCAGCTCTCCTCTGCTTCATATCCCCTGTTTTCTAGTCAGCAAACAGGTTACTTCCAACCACCGGGAAACCAACAGCACAGTGGTAGTGGTGGTGGTGGCAGCGGCAACATCGGCAGCGGCTCAGACTTTCCGGCGTCAACTTGGTCAGATACCAGTGGCTATCCTCCTCCATCCGGTTCAAGCTGA 1128 0.5168 MVSALTHVVSGSGGQGRTEWNPVTSPRGQPSPSSSVLSPYLSSSSSSSSSSSNASSSVLSSASGSNASWVGHKRARDQHSSVYGSFSDFRVPSQGQSSSGAEEGTNVAVSAVVETVAAVTAEESGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRVVPPAHNFPATRLAVSDSPVTYFQHQTTNLPPPLPPPQPPFSQSPSFQSQSDLIRDYWEYSQLLQSSDEFQQQQQHQQQEQHSNLLQQWIYNSQLTALQSSSLLLSSSPLFSSSSPTAFSPSSQLSSASYPLFSSQQTGYFQPPGNQQHSGSGGGGSGNIGSGSDFPASTWSDTSGYPPPSGSS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2170 375 FunFam Ethylene-responsive transcription factor 2 129 188 - -
Lele06g2170 375 CDD AP2 138 189 IPR001471 GO:0003700|GO:0006355
Lele06g2170 375 SUPERFAMILY DNA-binding domain 130 188 IPR016177 GO:0003677
Lele06g2170 375 PANTHER DNA-BINDING DOMAIN 60 276 IPR044808 GO:0003700|GO:0009873
Lele06g2170 375 MobiDBLite consensus disorder prediction 220 234 - -
Lele06g2170 375 Pfam AP2 domain 130 179 IPR001471 GO:0003700|GO:0006355
Lele06g2170 375 Gene3D AP2/ERF domain 129 189 IPR036955 GO:0003700|GO:0006355
Lele06g2170 375 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Lele06g2170 375 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Lele06g2170 375 MobiDBLite consensus disorder prediction 215 239 - -
Lele06g2170 375 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Lele06g2170 375 MobiDBLite consensus disorder prediction 326 375 - -
Lele06g2170 375 MobiDBLite consensus disorder prediction 1 73 - -
Lele06g2170 375 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Lele06g2170 375 MobiDBLite consensus disorder prediction 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2170 Lele-ChrLele06 26894634 26895885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2170 122 194 AP2-EREBP Transcription Factor Family AT2G33710 78.082 6.31e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele06g2170 AP2 7.1e-15 CL0081