Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2153 ATGCCTAATATTTACAACGCTCTGGTAGTTAAGGGTCGAGATACTGTTGGTCAACAAATTAACGTGACTTGTGAAGTACAACAATTATTAGGAAATAATCGAGTTAGAGCTGTAGCTATGAGTGCTACAGATGGTCTAATGAGAGGAATGGATGTGATTGACACGGGAGCTCCCCTAAGTGTTCCAGTCGGCGGAGCAACTCTAGGACGAATTTTCAACGTGCTTGGAGAACCTATTGATAATTTAGGTCCTGTAGATACTCGCACAACATCTCCTATTCATAGATCCGCGCCTGCCTTTATACAGTTAGATACAAAATTATCCATTTTTGAAACAGGAATTAAAGTAGTAGATCTTTTAGCTCCTTATCGCCGTGGAGGAAAAATAGGACTTTTCGGTGGAGCTGGGGTGGGTAAAACAGTACTCATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGGGGTGTATCCGTATTTGGGGGAGTAGGTGAACGTACTCGTGAGGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAACAAAATATTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAAATGAATGAACCACCTGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCGGAATATTTCCGAGATGTCAATGAGCAAGATGTACTTCTATTTATCGACAATATCTTCCGATTCGTCCAAGCAGGATCCGAAGTATCCGCCTTATTGGGTCGAATGCCTTCCGCTGTGGGTTATCAACCCACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCCATAACTTCTATTCAAGCAGTTTATGTACCTGCAGACGATTTGACCGACCCTGCTCCTGCCACGACATTTGCCCATTTAGATGCTACTACCGTACTATCAAGAGGATTGGCTGCAAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAACGTCAACTATGCTACAACCTCGGATCGTTGGCGAAGAACACTATGAAACTGCGCAAAGAGTTAAACAAACTTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTAGACAAATTATCCGAAGAGGATCGCTTAACCGTAGCAAGAGCACGAAAAATTGAGCGTTTCTTATCACAACCTTTTTTCGTAGCAGAAGTATTTACCGGTTCGCCGGGGAAATATGTTGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGATGGTCTTCCCGAACAGGCCTTTTATTTGGTAGGTAATATCGATGAAGCTACTGCGAAGGCTACGAACTTAGAAATAGAGAGCAAATTGAAGAAATGA 1380 0.4138 MPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMDVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDKLSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEIESKLKK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2153 459 Gene3D - 59 335 IPR027417 -
Lele06g2153 459 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 1 58 IPR036121 GO:0046034|GO:1902600
Lele06g2153 459 TIGRFAM atpD: ATP synthase F1, beta subunit 1 451 IPR005722 GO:0015986|GO:0045261|GO:0046933
Lele06g2153 459 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 113 333 IPR000194 GO:0005524
Lele06g2153 459 SMART AAA_5 125 317 IPR003593 -
Lele06g2153 459 Gene3D - 336 459 IPR024034 -
Lele06g2153 459 Hamap ATP synthase subunit beta [atpB]. 1 451 IPR005722 GO:0015986|GO:0045261|GO:0046933
Lele06g2153 459 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 336 450 - -
Lele06g2153 459 FunFam ATP synthase subunit beta 40 385 - -
Lele06g2153 459 PANTHER ATP SYNTHASE 1 456 - -
Lele06g2153 459 CDD ATP-synt_F1_beta_C 340 447 - -
Lele06g2153 459 Pfam ATP synthase alpha/beta family, beta-barrel domain 1 56 IPR004100 GO:0046034|GO:1902600
Lele06g2153 459 FunFam ATP synthase subunit beta 336 455 - -
Lele06g2153 459 CDD F1-ATPase_beta 58 338 - -
Lele06g2153 459 Gene3D - 1 58 - -
Lele06g2153 459 FunFam ATP synthase subunit beta, chloroplastic 1 58 - -
Lele06g2153 459 ProSitePatterns ATP synthase alpha and beta subunits signature. 324 333 IPR020003 GO:0005524
Lele06g2153 459 CDD ATP-synt_F1_beta_N 1 59 - -
Lele06g2153 459 FunFam ATP synthase subunit beta 59 335 - -
Lele06g2153 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2153 Lele-ChrLele06 24147513 24148892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2153 55 390 Primary Pumps ATPases(2) AT1G20260 27.049 1.12e-27 113