Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2112 ATGAAGTTGGGGCATACTTGTAAATTGATTTCATTCGTTCTTTCCATAATATTTAAGCGCATACTAGGGTTTAACTTTGCTTCCCCTCCCTGGGTCACCACTTCGCCGCAGAAGCAGCGTAAGGACAGGAGTAGGATGTCGCACAGGAAGTTTGAACACCCCAGGCATGGTTCTCTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGCCACCCAAGCTTACCGCTTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTGAGGGAGGTCGAGAAACCTGGGTCAAAACTTCACAAGAAGGAAACCTGTGAGCCTGTTACAATTATTGAGACACCTCCAATGGTTATTGTTGGAGTTGTGGGTTATGTGAAGACTCCTCGGGGCCTTCGGACATTGAGCACTGTATGGGCTCAGCATTTGAGTGAGGATGTGAAGCGAAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCCTGAAGTACTCCAAGCAGTTTGAATCTGAAGAAGGGAAGAAAAGCATTCAGGCTCAACTTGAGAAAATGAAGAAGTATGCATCAGTTGTTCGTGTTTTGGCTCACACCCAGATTAGGAAAATGAAAGGATTGAAGCAGAAGAAGGCACACCTCATGGAGATTCAGGTCAATGGTGGTACCATTGCCCAGAAAGTGGACTATGCATACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTATTCCAGAAGGATGAGATGATCGATCTCATCGGTGTTACAAAGGGTAAAGGGTATGAAGGTGTTGTCACTCGTTGGGGTGTGACCCGCCTTCCCCGCAAGACTCACAGGGGTTTGAGGAAAGTTGCATGTATTGGTGCCTGGCATCCTGCTAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGAACAGAGTTGAACAAGAAGGTTTACAAGCTTGGCAAAGCTGGAGACGAGTCACATACTGCTATCACTGACTTTGACAGGACTGAGAAGGACATAACTCCAATTGGTGGCTTCCCTCACTATGGTATTGTAAAGGATGATTATTTGATGATCAAGGGATGCTGTGTTGGTCCAAAGAAAAGGGTTATCACATTGCGCCAATCCCTCCTTAAGCAGACTTCCCGTGTTGCTCTGGAGGAGATCAAACTCAAGTTTATCGACACATCTTCCAAGTTTGGCCATGGCCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTTGGACGTCTCAAGGCATAA 1305 0.4697 MKLGHTCKLISFVLSIIFKRILGFNFASPPWVTTSPQKQRKDRSRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLSTVWAQHLSEDVKRRFYKNWCKSKKKAFLKYSKQFESEEGKKSIQAQLEKMKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHTAITDFDRTEKDITPIGGFPHYGIVKDDYLMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2112 434 ProSitePatterns Ribosomal protein L3 signature. 257 280 IPR019926 -
Lele06g2112 434 FunFam 60S ribosomal protein L3 89 206 - -
Lele06g2112 434 Gene3D Ribosomal protein L3, domain 3 46 319 IPR044892 -
Lele06g2112 434 FunFam 60S ribosomal protein L3 271 319 - -
Lele06g2112 434 SUPERFAMILY Translation proteins 49 415 IPR009000 -
Lele06g2112 434 FunFam Ribosomal protein L3 310 434 - -
Lele06g2112 434 Gene3D - 128 252 - -
Lele06g2112 434 Gene3D Translation factors 89 430 - -
Lele06g2112 434 Pfam Ribosomal protein L3 46 415 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele06g2112 434 FunFam 60S ribosomal protein L3 46 119 - -
Lele06g2112 434 MobiDBLite consensus disorder prediction 32 59 - -
Lele06g2112 434 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 46 429 IPR045077 GO:0003735|GO:0005840|GO:0006412
Lele06g2112 434 FunFam 60S ribosomal protein L3 128 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2112 Lele-ChrLele06 23297599 23302873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2112 46 432 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.788 0.0 695