LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele06g2112	ATGAAGTTGGGGCATACTTGTAAATTGATTTCATTCGTTCTTTCCATAATATTTAAGCGCATACTAGGGTTTAACTTTGCTTCCCCTCCCTGGGTCACCACTTCGCCGCAGAAGCAGCGTAAGGACAGGAGTAGGATGTCGCACAGGAAGTTTGAACACCCCAGGCATGGTTCTCTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGCCACCCAAGCTTACCGCTTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTGAGGGAGGTCGAGAAACCTGGGTCAAAACTTCACAAGAAGGAAACCTGTGAGCCTGTTACAATTATTGAGACACCTCCAATGGTTATTGTTGGAGTTGTGGGTTATGTGAAGACTCCTCGGGGCCTTCGGACATTGAGCACTGTATGGGCTCAGCATTTGAGTGAGGATGTGAAGCGAAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCCTGAAGTACTCCAAGCAGTTTGAATCTGAAGAAGGGAAGAAAAGCATTCAGGCTCAACTTGAGAAAATGAAGAAGTATGCATCAGTTGTTCGTGTTTTGGCTCACACCCAGATTAGGAAAATGAAAGGATTGAAGCAGAAGAAGGCACACCTCATGGAGATTCAGGTCAATGGTGGTACCATTGCCCAGAAAGTGGACTATGCATACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTATTCCAGAAGGATGAGATGATCGATCTCATCGGTGTTACAAAGGGTAAAGGGTATGAAGGTGTTGTCACTCGTTGGGGTGTGACCCGCCTTCCCCGCAAGACTCACAGGGGTTTGAGGAAAGTTGCATGTATTGGTGCCTGGCATCCTGCTAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGAACAGAGTTGAACAAGAAGGTTTACAAGCTTGGCAAAGCTGGAGACGAGTCACATACTGCTATCACTGACTTTGACAGGACTGAGAAGGACATAACTCCAATTGGTGGCTTCCCTCACTATGGTATTGTAAAGGATGATTATTTGATGATCAAGGGATGCTGTGTTGGTCCAAAGAAAAGGGTTATCACATTGCGCCAATCCCTCCTTAAGCAGACTTCCCGTGTTGCTCTGGAGGAGATCAAACTCAAGTTTATCGACACATCTTCCAAGTTTGGCCATGGCCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTTGGACGTCTCAAGGCATAA	1305	0.4697	MKLGHTCKLISFVLSIIFKRILGFNFASPPWVTTSPQKQRKDRSRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLSTVWAQHLSEDVKRRFYKNWCKSKKKAFLKYSKQFESEEGKKSIQAQLEKMKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHTAITDFDRTEKDITPIGGFPHYGIVKDDYLMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA	434

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele06g2112	434	ProSitePatterns	Ribosomal protein L3 signature.	257	280	IPR019926	-
	Lele06g2112	434	FunFam	60S ribosomal protein L3	89	206	-	-
	Lele06g2112	434	Gene3D	Ribosomal protein L3, domain 3	46	319	IPR044892	-
	Lele06g2112	434	FunFam	60S ribosomal protein L3	271	319	-	-
	Lele06g2112	434	SUPERFAMILY	Translation proteins	49	415	IPR009000	-
	Lele06g2112	434	FunFam	Ribosomal protein L3	310	434	-	-
	Lele06g2112	434	Gene3D	-	128	252	-	-
	Lele06g2112	434	Gene3D	Translation factors	89	430	-	-
	Lele06g2112	434	Pfam	Ribosomal protein L3	46	415	IPR000597	GO:0003735\|GO:0005840\|GO:0006412
	Lele06g2112	434	FunFam	60S ribosomal protein L3	46	119	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele06g2112	Lele-ChrLele06	23297599	23302873	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele06g2112	46	432	Cytoplasmic Ribosomal Protein Gene Family	AT1G43170	85.788	0.0	695

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