Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2103 ATGCTGGGGGACTCATCGTCGGCTGTATTGGGTGTCGGCGGAGGAGGTGGCGGTGGTAACTCTTCTGATGCAGTGACGCCGACATTCGTGGCTGCTGCAGCAGCAGGAACGTCTCCCCATGATGGTGGCGAGTCGACCGCGGCGACCGTGGCGGCCGCGGCAGCTGGATCGAATTCCAGGGAGGAAAATATGAGGGGAAGAGGGGAAGAAGGTGACCGAAGCTTTGGCGGCAAAAGGTGGCCCCGGCAAGAGACTTTGGCGCTCTTGAAAATGCGCTCAGATATGGACGTGGCGTTTCGAGATGCCAGCGTTAAAGGTCCTCTCTGGGAAGAAGTTTCCAGGAAGATGGCAGAGCATGGGTATCACAGAAGCGCCAAGAAATGCAAAGAGAAATTCGAGAACGTGTACAAGTACCACAAGAGAATAAAAGATGGCCGAACTGGGAAATCTGAAGGCAAAACGTATCGTTTCTTTGATCAATTAGAAGCTCTCGATCATCATAACCCTCCTTCTCTTCTTACAGTTCAATCCTCATCATCACAGCCACCGCAAGCACCACCGTCAAAGCCACCCTCGCAGTTACTAGCAATACGTGCAACACCAGTTTCAGTGGTGGCGACGACTCCATTTTCCTCCACAAATGTTAATCATCCTTCTTATCTCTCTATTGTTCCATCAACGATCACATCTGAACCCAATGTTCTCCCTCCACCTATCAACCCCACTTCTTCCATAATTAATAATCCGCCTTCCTATAATATTTTCCAACCACAAGCGCCGCCGCCAACATCAACCGCAAACCCTATCCAATCTTCTTTCCCCGCTGACCTCTTGTCTAATTCTCCTTCTTCCTCGACCTCCTCCGATGAATCGATAGAGCGGCGGCAACGACGGAAGATGAAGTGGAAGAACTTCTTTGGAAGGCTGACGAAGGAGGTGATAGAGAAACAGGAGCAAATGCAGAAGAGGTTATTGGAGGCCATTGAGAAGCGAGAACATGAGAGGATGGTTCGTGAAGAAGCTTGGAGAATGCAGGAGATGGCGAGGATTAATCGAGAGCGTGAAATATTGGCACAGGAAAGATCTATAGCGGCTGCCAAGGACGGTGCTGTAATGGCATTATTGCAGAAGATCACTGAACAGCAAAATCTCGGCCTCCCACTGAATAATATCAACACTTCTCCTCCTCCACCACCACCACTGACGGCACAACCGGTTCCGGCTCCGACTCCGGCCCCGGCTCATCCAGCCGCTCAGCCACCGCCGACCTCAGTCACAAACATGGAGATTGTAGCAAACGATAATAATAACTATAATGGGGAGAATTTGATGACACCGACTTCGTCGAGGTGGCCGAAAGTGGAGGTTCAGGCATTGATAAAGCTACGAACGAGCATGGACGAGAAGTACCAAGAGTACGGACCAAAAGGGCCATTGTGGGAGGAGATCTCGGTGGCGATGCGGAGGCTCGGGTACAACAGAAACGCTAAGAGGTGCAAGGAGAAGTGGGAGAACATAAACAAGTACTTCAAGAAGGCGAAGGAGAACAACAAGAAGAGGCCGCAAGATGCTAAGATATGTCCGTATTTCCACCAGCTAGATGCTCTATACAGGGAGAAGAACAAGCTTGAGAAGATCAATTCTCCTCCTCTGCCGTCGTTAGCCACCACGACGAACCATAATCTGACTCCGGCAGATAATAATAGCATAATACCAACATCAGCGCCGCTGATGGTTCAGCCGGAGCAACAATGGCATCCGCAGCAAGAGGAAAACAACAATAACAATGCAGAGTTGGAGGAGGAAGAAGAAGAATACATGGACGAAGAGAAGGATATTGAAGTCGAAGATGACGAAGGAGAAGAAGAGGAAGGAGGTGGCAATTATGAGATAGTAGTGAGCAAGCCAGCTTCAGTGAGTGCAGTTGAGTGA 1932 0.5 MLGDSSSAVLGVGGGGGGGNSSDAVTPTFVAAAAAGTSPHDGGESTAATVAAAAAGSNSREENMRGRGEEGDRSFGGKRWPRQETLALLKMRSDMDVAFRDASVKGPLWEEVSRKMAEHGYHRSAKKCKEKFENVYKYHKRIKDGRTGKSEGKTYRFFDQLEALDHHNPPSLLTVQSSSSQPPQAPPSKPPSQLLAIRATPVSVVATTPFSSTNVNHPSYLSIVPSTITSEPNVLPPPINPTSSIINNPPSYNIFQPQAPPPTSTANPIQSSFPADLLSNSPSSSTSSDESIERRQRRKMKWKNFFGRLTKEVIEKQEQMQKRLLEAIEKREHERMVREEAWRMQEMARINREREILAQERSIAAAKDGAVMALLQKITEQQNLGLPLNNINTSPPPPPPLTAQPVPAPTPAPAHPAAQPPPTSVTNMEIVANDNNNYNGENLMTPTSSRWPKVEVQALIKLRTSMDEKYQEYGPKGPLWEEISVAMRRLGYNRNAKRCKEKWENINKYFKKAKENNKKRPQDAKICPYFHQLDALYREKNKLEKINSPPLPSLATTTNHNLTPADNNSIIPTSAPLMVQPEQQWHPQQEENNNNNAELEEEEEEYMDEEKDIEVEDDEGEEEEGGGNYEIVVSKPASVSAVE 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2103 643 MobiDBLite consensus disorder prediction 391 420 - -
Lele06g2103 643 MobiDBLite consensus disorder prediction 595 626 - -
Lele06g2103 643 ProSiteProfiles Myb-like domain profile. 79 136 IPR001005 -
Lele06g2103 643 Coils Coil 589 619 - -
Lele06g2103 643 MobiDBLite consensus disorder prediction 265 289 - -
Lele06g2103 643 MobiDBLite consensus disorder prediction 247 297 - -
Lele06g2103 643 ProSiteProfiles Myb-like domain profile. 449 507 IPR001005 -
Lele06g2103 643 MobiDBLite consensus disorder prediction 62 79 - -
Lele06g2103 643 FunFam Trihelix transcription factor GT-2 451 512 - -
Lele06g2103 643 MobiDBLite consensus disorder prediction 1 79 - -
Lele06g2103 643 Gene3D - 451 513 - -
Lele06g2103 643 Gene3D - 80 141 - -
Lele06g2103 643 MobiDBLite consensus disorder prediction 582 643 - -
Lele06g2103 643 Coils Coil 314 334 - -
Lele06g2103 643 MobiDBLite consensus disorder prediction 389 423 - -
Lele06g2103 643 PANTHER FI21293P1 44 608 - -
Lele06g2103 643 CDD GT1 78 143 - -
Lele06g2103 643 Pfam Myb/SANT-like DNA-binding domain 78 164 IPR044822 -
Lele06g2103 643 Pfam Myb/SANT-like DNA-binding domain 449 536 IPR044822 -
Lele06g2103 643 MobiDBLite consensus disorder prediction 168 193 - -
Lele06g2103 643 FunFam Trihelix transcription factor GT-2 80 141 - -
Lele06g2103 643 SMART sant 447 509 IPR001005 -
Lele06g2103 643 SMART sant 76 138 IPR001005 -
Lele06g2103 643 CDD GT1 449 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2103 Lele-ChrLele06 19387351 19390183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2103 76 590 Trihelix Transcription Factor Family AT1G76890 46.840 2.30e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele06g2103 Myb_DNA-bind_4 1.4e-20 CL0123