Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2101 ATGGAGAATAACGCAATGTTGCCTCTCCTTTCATCAGGAAATCGGGTTCTTACATTGATGGTGAACACAATGAAGCCCATCCAAAAAGAAGGAGAAAAGAGATTTTTGGAGAAATCTACACTAGAGATCCCTGAACCCACAATGATCAAACCAACAATCTCTGAGTTCAGTGGGGTGGACACGGACGCACAATTGGCTAATGTGATTACTAGCTTTCTCCACACTATAAATCATAGGAGAAATCACTTCTTAGGGTATCCAACTAATCAAGACTTCAACTATGATGCATTGGTGCAATTGCTACGTTTCTTCTTGAACAATATGGGTGATCCATTTATTGGCAGCAGCTTCTCTCTCAACTCAAATCCGTTTGAGCTGTGTGTACTAGATTGGTTTGCCAAACTTTGGAAAATAGGGAAGAATGAGTATTGGGGATATGTTACAAATGGTGGAACTGAAGGAAATTTTCATGGGATTTTAGTAGGGAGGGAAGTATTTCCCGATGGAATTCTTTACACATCACGGGACTCTCATTATTCAGTGTTAAAGGCGGCAAGACTCTTTAGAGTCAAGTGTGTGGTAATTGGGACTCTAATCTCAGGTGAGATTGATTATAATGAATTGAAATATTCAATTCTTGACAACAAGGACAAGCCAGCCATCATCAACCTAAACATAGGGACAACTATAAAAGGTGGCATTGATGATGTTGATCTTGTACTACAAATTCTTGAAGATTGTGGTTTTGCTGAAGATCGGTTCTACATTCATTGCGATGCAGCTTTATTTGGACTGATGCTCCCATTTCTTAAAGGAGCACCAAAGATTACTTTCAAGAAACCTATTGGAAGTATAACTGTCTCAGGCCATAAGTTCCTCGGATGCCCTATTCCTTGTAGCATTATAATAACTCGTTTAAAATACATTGACCTTCTGTCTAAAGAAGTTGAATACATCTCTTCAAGAGACACAACTATCTCTGGAAGCCGAGGAGGTCATGCATCCATCTTCCTTTGGTATGCTCTCAACAAGAAAGGCTCCAACGGCCTCCAGAAAGAAGCTGAAGAGTGCAACGAGAAGGCAATTTACCTTCTGAATCGCCTGACAGACATCGGCATCGGAGCCATGCTGAACAAGTTTAGCAACACCGTGGTGTTCGAGAGGCCCCTCGACGATGCATTTTCTCATAAGTGGAGCTTGTCTAATGAAGGCAATGTATCGCATGTGGTAGTGATGCCACACGTCACTGTAAAGATGTTGGATTCCTTTGTGAGCGATTTTGCCAATAATCGATCAATTTGGTACAAAGATAATAGCGGCAAGAAGCCTCCTTGTCTTGGTGAAGAGATTGGTGCTAAGAACTGTGCTTGTTTAGTCCACAAGTTGATCTCGTTTTGA 1398 0.412 MENNAMLPLLSSGNRVLTLMVNTMKPIQKEGEKRFLEKSTLEIPEPTMIKPTISEFSGVDTDAQLANVITSFLHTINHRRNHFLGYPTNQDFNYDALVQLLRFFLNNMGDPFIGSSFSLNSNPFELCVLDWFAKLWKIGKNEYWGYVTNGGTEGNFHGILVGREVFPDGILYTSRDSHYSVLKAARLFRVKCVVIGTLISGEIDYNELKYSILDNKDKPAIINLNIGTTIKGGIDDVDLVLQILEDCGFAEDRFYIHCDAALFGLMLPFLKGAPKITFKKPIGSITVSGHKFLGCPIPCSIIITRLKYIDLLSKEVEYISSRDTTISGSRGGHASIFLWYALNKKGSNGLQKEAEECNEKAIYLLNRLTDIGIGAMLNKFSNTVVFERPLDDAFSHKWSLSNEGNVSHVVVMPHVTVKMLDSFVSDFANNRSIWYKDNSGKKPPCLGEEIGAKNCACLVHKLISF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2101 465 Pfam Pyridoxal-dependent decarboxylase conserved domain 170 370 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele06g2101 465 Gene3D - 116 331 IPR015421 GO:0003824
Lele06g2101 465 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 284 305 IPR021115 GO:0016831
Lele06g2101 465 Gene3D Aspartate Aminotransferase, domain 1 334 431 IPR015422 GO:0003824
Lele06g2101 465 SUPERFAMILY PLP-dependent transferases 48 429 IPR015424 -
Lele06g2101 465 PANTHER - 31 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2101 Lele-ChrLele06 18334533 18338080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2101 226 410 Calmodulin-binding Proteins AT2G02010 26.804 4.59e-08 53.5