Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2090 ATGAGTAAACTAGCAGAGGAAGAGTCCAAGAAAGCTGTTCTTGTACTTGAGCAAGCATCAGTATCCTGTAATATTTGGTTCATTCACAAGGGCAACCTCATATATACAAGCGCAGATAGTAAACATACATCTGAAATTAAGACTGCCCCATCATTATTGGTGCTTAGTTCAACTACAGAAGGCAAACAATCTGAGATCAATTCTGAATGTACTCCTAATTCACATAAATATTTAGATGCTGAAAATATGGAAGGAATGCTCAGAAATTTTAGTCATTGTTCTGCAGAATCAGTAAAATCATGTATTAAGTTGACAGATTTGCTATCTCTTGAGGAGGGAAGTGACGTACAGGAGGACACAAGAGAACAAGATGGAAGACTGGAACTAGCTAATGTAGATGCTACTTGCTCCAGATCAAAAGAACTTGTAGGGGCTGTGGATAGCAGCAATGTAGAAGACAACAGCACTCTGCAGGCGGATGCATTAGAAAGCTTTTGTGCTGATGAGATAAGTAGAAGAAGAGAGCTTGAAGAACTATTGGCTGGGGAAAAGCAAGAATTACAAAAACTGAAAGATCAACAAGTTGAAATCCAGGGAAAACTACAAATGATCCAAAACCAAAATTCAGCACTTACCAGCCAATTTGTTGAGTCCCAGACTGTGGTGACAGAGTTGGAGGAGAAAATCTTATCAGCAGTGGAACTCTTGATAAGCTTCAAGGACAAACGGGATAAGTTAAAGATTGAGCATTCAAATGCAGTAAGGGAAGTCAACAAGTTGAGGAAGTTTGTAAACGCAGATGCTGAATATCCTCATGGAACAGAATTTCCTACATTTTCATTCTTAGAGATCAATGAAGCAACTAATGATTTTGATCCATCTTGGAAGATTGGAGAGGGAAGGTATGGAAGTGTTTACAAAGGATTGCTTCGCAATATGCAAGTTGCCATAAAGATGTTGCCTTCGTATGGTTGTCAGAGCCATCTGAACTTCCAACACCAGGTTGAGTTTTTGAGTAGGGTAAGACATCCAAACCTTGTAGCACTGATTGGAAGCTGCCAAGAATCTAGATCACTTGTCTATGATTACCTTAATAATGGCAGCCTTGAGGACCACCTTGCCCTCAAAGACAAAACAACACTTCCTTGGCAAATTCGAATATCCATTGCTGCTGACATATGCTCTGCTCTTATCTTCCTTCACTCCAGCAAGCCTTGTATAATCCATGGGAATTTGAAGCCGAGTAAAATTCTCCTTGATGTAAACTTTGCTGCCAAACTTAGTGTTTTGGGCATTTCTTCTTTGGTCCAGTCCAGTGGGCATTCAGCTGACAGTAAAACAACAGTTGACAACCAAAATGAAAGTTTGGTGTATGTGGATCCAGAATTTCTTCTCACTGGGAAGTTCACACCAGAATCTGATGTGTATTCGTTTGGAATCATATTGTTACAACTTTTAACGGCCAGACCTCTTTCAGGAATAGTAAGGGATACAAAATGTGCATTGGAGAAGGAAAATCTCAAAGCGGTATTGGACATTTCAGCTGGAGAATGGCCACTTTATCAAGTTGAACAGCTAGCATATTTGGCATTGAGGTGTTCTGAAAAGACTCAGCTGAATCGGCCAGACCTATTATCAGAAATCTGGAGTGTTCTTGGACAATTACGAACTTCATGCAGTAACATATTGCCATATTCAACTTCCAAGAAGCTTCATCGTCCTCCTTCTCACTTTGTCTGCCCCATATTTCAGGAGGTCATGAAAGATCCTTATATAGCTGCAGATGGCTTCACATATGAAGAAGACGCAATAAGAGGATGGTTGGATAGTGGTCACAACACTTCCCCAATGACAAACCTTAAGCTTGAACATACCAACCTGGTGCCTAACTATGCATTACTTAATGCAATTCAGGAGTGGCAGCACCTGCAATGA 1935 0.4036 MSKLAEEESKKAVLVLEQASVSCNIWFIHKGNLIYTSADSKHTSEIKTAPSLLVLSSTTEGKQSEINSECTPNSHKYLDAENMEGMLRNFSHCSAESVKSCIKLTDLLSLEEGSDVQEDTREQDGRLELANVDATCSRSKELVGAVDSSNVEDNSTLQADALESFCADEISRRRELEELLAGEKQELQKLKDQQVEIQGKLQMIQNQNSALTSQFVESQTVVTELEEKILSAVELLISFKDKRDKLKIEHSNAVREVNKLRKFVNADAEYPHGTEFPTFSFLEINEATNDFDPSWKIGEGRYGSVYKGLLRNMQVAIKMLPSYGCQSHLNFQHQVEFLSRVRHPNLVALIGSCQESRSLVYDYLNNGSLEDHLALKDKTTLPWQIRISIAADICSALIFLHSSKPCIIHGNLKPSKILLDVNFAAKLSVLGISSLVQSSGHSADSKTTVDNQNESLVYVDPEFLLTGKFTPESDVYSFGIILLQLLTARPLSGIVRDTKCALEKENLKAVLDISAGEWPLYQVEQLAYLALRCSEKTQLNRPDLLSEIWSVLGQLRTSCSNILPYSTSKKLHRPPSHFVCPIFQEVMKDPYIAADGFTYEEDAIRGWLDSGHNTSPMTNLKLEHTNLVPNYALLNAIQEWQHLQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2090 644 Gene3D Transferase(Phosphotransferase) domain 1 364 566 - -
Lele06g2090 644 PANTHER OS02G0152300 PROTEIN 8 639 - -
Lele06g2090 644 Pfam Protein tyrosine and serine/threonine kinase 296 544 IPR001245 GO:0004672|GO:0006468
Lele06g2090 644 Pfam U-box domain 575 641 IPR003613 GO:0004842|GO:0016567
Lele06g2090 644 Gene3D Phosphorylase Kinase; domain 1 263 363 - -
Lele06g2090 644 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 573 644 IPR013083 -
Lele06g2090 644 SUPERFAMILY Protein kinase-like (PK-like) 271 544 IPR011009 -
Lele06g2090 644 CDD RING-Ubox_WDSUB1_like 578 619 - -
Lele06g2090 644 SUPERFAMILY RING/U-box 565 641 - -
Lele06g2090 644 SMART Ubox_2 577 640 IPR003613 GO:0004842|GO:0016567
Lele06g2090 644 Coils Coil 166 207 - -
Lele06g2090 644 ProSitePatterns Protein kinases ATP-binding region signature. 297 318 IPR017441 GO:0005524
Lele06g2090 644 ProSiteProfiles U-box domain profile. 573 644 IPR003613 GO:0004842|GO:0016567
Lele06g2090 644 ProSiteProfiles Protein kinase domain profile. 291 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2090 Lele-ChrLele06 17647340 17664335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2090 3 642 U-box Gene Family AT3G49060 45.575 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele06g2090 PK_Tyr_Ser-Thr 6.1e-35 CL0016