Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2089 ATGCCAGTAGCGAAACTTAAAGCTTCTAGAAGTCCAGATGTCATGAAAGCAGAGGCTGGAAATGATTCCTTAGATACCATAATCAGACAAGCAATTGGCAAAGAACCTTTCCTTTCTTTTTCAAGGACTGGTGACAGCCCTGTGCAGTGGATTCAATTACTTCATGCTTTAGATCAGCAAGAACTCCCAGGTTGGCCTGTGCTCACTCCTCTGAAGGTTCAGTTGCAGAAGTGTGACAAGTGTTCTCAAGAATTTTGCTCTCAAATTAACTACAGAAGACATCTTCGTGGGCAACATCGACTAAAAAAACTTGATAAGGATTCTACAAACAACAGAGATCTGTTAGGGGCATATTGGGATAAGCTTTCTCTAGAAGAGGCGAAGGAAGTTTTATCATTTAATAATGTGATGCTGGAGGAAGTTCCAGGGTCTGCAATTTTAAAAGCTCTGGCAACCCTTATTCGAAAACAAGGATTTTCATCATTTCCACAATATTATCTGAAGGCTGGTTCTGCCCTTTTGGATATTGTTCAAGCTAGATACAGTTTTCCTATATCTTCACAGGAGTTGTTTGGTGTACTTGATGATGCCAGTGAAAAAACATTTTTATGTGGAAATGCGGTTTCTATGAAGAAATATATTTTTGATGGAGAGGCTGGGAAGATTAGTCTTGAACCAAAAAACGTTGTTGCTTGCACAAGTTTCTTGCTAGAGCAGATTTTGGTAAAAGCATGGCTTGCTGACAAGGATGTTGAAGCATTAAGATGGCAGAAGCTACTGGTGGAGGAAGAAGAAGCTGCTCAGAAAAGGAAAGCATGTTTACCACTTGACTTGTTTTTTTCTGGGCATGCTGGTGAGTCTTTTCAGTATTCTTATAGTGCTCTTAATTTGACTTAA 897 0.3958 MPVAKLKASRSPDVMKAEAGNDSLDTIIRQAIGKEPFLSFSRTGDSPVQWIQLLHALDQQELPGWPVLTPLKVQLQKCDKCSQEFCSQINYRRHLRGQHRLKKLDKDSTNNRDLLGAYWDKLSLEEAKEVLSFNNVMLEEVPGSAILKALATLIRKQGFSSFPQYYLKAGSALLDIVQARYSFPISSQELFGVLDDASEKTFLCGNAVSMKKYIFDGEAGKISLEPKNVVACTSFLLEQILVKAWLADKDVEALRWQKLLVEEEEAAQKRKACLPLDLFFSGHAGESFQYSYSALNLT 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2089 298 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Lele06g2089 298 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 272 - -
Lele06g2089 298 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2089 Lele-ChrLele06 17634834 17638927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2089 20 272 C2H2 Transcription Factor Family AT4G25610 63.780 5.09e-115 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele06g2089 None None None