Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2038 ATGGCTGAAGAAGACTGGGATCTCTCCGCTGTCGTGCGAGGTTGCAGATCCTTCCCCTCCACAGCCACCGCCGCTGCCGGCACTGCTACAACTAGTACAACACTGTCGTCTACTTCTTCAGCCAAGGCCGTTTCTTTACCATTAATCAAGCAAGAAAATGACATCTTCTCTTTTCCCAGTTTGATTCAACCCACAACCAATTGGTTCCAAGAACTTCACCAATTGTTCAGACCCTTTATCCCCACCACCACCATCACAACCACCACTATCTCCACTAGTGGTTGTGACATATATCCCAATTCCTCTTTTTCAGGTGCAGGGTCCAGTAGCAATAATAATACTAATAATATAAATATAAATTCTGCATCATCCCTTGCTTCTTCTTCTTCTTCTTCTTTCGCATCCAATATTGAAACCTCGCCCTCCACTTCTGGCTTTCAGAGATTTCATGACCAACATGTACAGAAACTCCAACAAGAGCAAATTCAACTAGTTCATCAGAAACAGCCATTTCAGACATTACCAGGTCAGATCAGTAGCGGAGGAGGTAGTAATTCTGGTATGACTTTACCAAATATGCAAACTGGTCAAGCAACCAGATCCAGGAAAAGAAAGAGTCAACAGAAAAGAATGGTTTGCCATGTGACAGCGGAAAATCTCACCTCAGATTCTTGGGCCTGGAGAAAATACGGTCAAAAGCCTATTAAAGGTTCTCCATACCCAAGGAACTATTATAGATGTAGCAGTTCAAAAGGTTGTGGGGCCCGGAAGCAAGTAGAACGGAGCAATACTGAACCAGATATGTTAATCGTCACGTACACCGGAGACCACACGCATCCGAGACCCACCCATCGGAACTCGCTCGCCGGAAGTACAAGGAACAAACTGTCCACAACGACGACCCGTAAGCAACCCGCCTCTCATAAATCTGGGTCACCAAGCAATACCGCAAACCGGGCATCGTCATCTTCACAGCTTTCTCCGACGACGCCTTTAACAGCAGTGGCGGTAGCGAACGACGAGTGTGCCGCTGAACCCATGTTAATCAATGAAGCGACTAGCCATTTTCCTGAGGATGAGTTCGACTTCGCCTCTCATGATGACATTTTGATACCAAACATGGCGGCCATGATGGATAAGTTCTCGCTTGGTGCTGTTGAGCTTCACGGTGGAATCGGACTTAGTGACGGTGGGGGTAATATCACTAGCGGCAATCCGGCAGATGGGTCGTACCCGAATACTGAATCCGGATTGACTCCGAATTTACAGCAGCCCATCTCCCCCCTCAGCCGGTCTAGTCCTGGTTAA 1308 0.4732 MAEEDWDLSAVVRGCRSFPSTATAAAGTATTSTTLSSTSSAKAVSLPLIKQENDIFSFPSLIQPTTNWFQELHQLFRPFIPTTTITTTTISTSGCDIYPNSSFSGAGSSSNNNTNNININSASSLASSSSSSFASNIETSPSTSGFQRFHDQHVQKLQQEQIQLVHQKQPFQTLPGQISSGGGSNSGMTLPNMQTGQATRSRKRKSQQKRMVCHVTAENLTSDSWAWRKYGQKPIKGSPYPRNYYRCSSSKGCGARKQVERSNTEPDMLIVTYTGDHTHPRPTHRNSLAGSTRNKLSTTTTRKQPASHKSGSPSNTANRASSSSQLSPTTPLTAVAVANDECAAEPMLINEATSHFPEDEFDFASHDDILIPNMAAMMDKFSLGAVELHGGIGLSDGGGNITSGNPADGSYPNTESGLTPNLQQPISPLSRSSPG 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2038 435 Pfam WRKY DNA -binding domain 223 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g2038 435 MobiDBLite consensus disorder prediction 397 435 - -
Lele06g2038 435 FunFam WRKY transcription factor 22 204 275 - -
Lele06g2038 435 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 364 IPR044810 GO:0003700
Lele06g2038 435 Gene3D WRKY domain 204 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g2038 435 SMART WRKY_cls 221 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g2038 435 MobiDBLite consensus disorder prediction 398 435 - -
Lele06g2038 435 MobiDBLite consensus disorder prediction 273 329 - -
Lele06g2038 435 MobiDBLite consensus disorder prediction 173 211 - -
Lele06g2038 435 ProSiteProfiles WRKY domain profile. 216 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g2038 435 SUPERFAMILY WRKY DNA-binding domain 215 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g2038 435 MobiDBLite consensus disorder prediction 284 329 - -
Lele06g2038 435 MobiDBLite consensus disorder prediction 173 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2038 Lele-ChrLele06 16065363 16066944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2038 200 352 WRKY Transcription Factor Family AT5G52830 62.092 3.65e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele06g2038 WRKY 1.2e-25 CL0274