Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2026 ATGGCCGACCACCAGCCTCCTCCTCCTCCGTCGCCACCATCACCAAAAGGCTATATATTAACAGCCTCTTCAATCTCCTACGCCAAAAGCACCACCACGATTCCGCCATTCTTACATCTTTTCAAATGCTGTACCACTGCAAACCCTCCTTCTTACATCCTCAAGCATGTTTCCCTCACCGCCTACCCCTCCCAAATCCTCGCCATTGTCGGCCCAAGTGGAGCCGGCAAGTCCACCCTCCTCGACATCCTTGCCGCCCGCACCTCCGCCACCTCCGGCACCCTCCTCCTCAACTCCTCCCCCTTTAATCCTTCCTCCTTCCGCAAGCTATCTGCTTACGTCCCACAACACGACGCCTGCCTCCCCCTCCTCACAGTCGCCGAGACCTTCGCCTTCGCCGCCCACCTCCTCCAGCCAAAGCCCTTCGACACCACCTCTCTTCTCGCCGAGCTCGGCCTCAGTCACTTAGCTCACACCAGGCTGGCCGATGGACTTTCCGGTGGAGAACGAAGAAGGGTCTCCATCGGCCTCAGCCTCCTCCACGACCCGGCCGTGTTGCTTCTCGATGAACCCACCTCGGGCCTTGACAGCACCGGCGCTTTTAAAGTCATGCAGATTCTAAAATCAATCTGTGTTTCACGTCACCGAACCATTGTGCTATCTATTCATCAACCAAGTTTCAAGATTTTATCTGTCATTGACAGAATCTTACTTCTCTCTAAAGGATCAGTTGTTCATTATGGAACTCTTGCTTCGCTTCAGAGTTTTCTTCACACTAATGGCTTCTCTGTGCCTCCTCAGCTCAATGCATTGGAATACGCCATGGAAATATTAAACCAAATCGATGAACTCGAACCCATGAACAAGACTCCTGATGAAGAAAGTCCTGCAAGTTCTCCATCATCTCAGAATTTAGCCACAACTACTTCATCAAGAAAGTTGATCCGTTATAGAAGCTCAAGAATCCATGAAATCTGTGCTCTTTACAGCAGATTTTGGAAGATAATTTACAGGACAAAGCAGTTACTTTTGACAAACACATTAGAAGCACTTTTTGTAGGCCTTGTTCTTGGAACGATTTACATCAACATTGGCTTCGGTAAGGAAGGGATTGAAAAAAGATTCGGTCTTTTTGCCTTCTCTCTCACTTTTCTCCTTTCTTCCACCACTGAAACTCTCCCGATCTTCATCGGCGAGAGACCGATCTTACTGAGAGAAACATCAAGTGGGGTTTATAGGTTATCTTCTTACATCATCGCCAACACACTCGTTTTCTTACCATACTTACTAGTTATCGCTGTTATCTACTCTATTCCAGTCTACTTCTTAGTGGGTTTGTGTGCTTCTTGGATTTCATTTGCGTACTTCGTTCTTGTCATTTGGCTCATAGTTCTAATGGCTAATTCATTTGTCCTTTTCTTAAGCTCTATTGCTCCTAACTACATTGCTGGAACTTCGCTCATGACAGTTCTTCTTGCTGCGTTTTTTCTGTTTTCTGGTTATTTCATCTCCAAAGAAAGCTTACCCAAATACTGGCTCTTCATGTATTTCTTCTCTATGTACAAGTACGCTCTTGATGCTCTTCTCATTAACGAATACTCTTGTTTGATCACGAGATGTTTCATATGGTACGAAGAAAATGATGGAGAATGTATGGTTACTGGAGGTGATGTGATGAACAAGAGAGGACTCAGTGAAGCACAGAGATGGATTAATGTGTATGCTTTGCTTGGTTTCTTTGTGTTGTACCGTGTGCTTTGTTTGTTTGTGTTGATCAGAAGGGTTTCAAGATCCAAAAGTTAG 1803 0.4587 MADHQPPPPPSPPSPKGYILTASSISYAKSTTTIPPFLHLFKCCTTANPPSYILKHVSLTAYPSQILAIVGPSGAGKSTLLDILAARTSATSGTLLLNSSPFNPSSFRKLSAYVPQHDACLPLLTVAETFAFAAHLLQPKPFDTTSLLAELGLSHLAHTRLADGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTGAFKVMQILKSICVSRHRTIVLSIHQPSFKILSVIDRILLLSKGSVVHYGTLASLQSFLHTNGFSVPPQLNALEYAMEILNQIDELEPMNKTPDEESPASSPSSQNLATTTSSRKLIRYRSSRIHEICALYSRFWKIIYRTKQLLLTNTLEALFVGLVLGTIYINIGFGKEGIEKRFGLFAFSLTFLLSSTTETLPIFIGERPILLRETSSGVYRLSSYIIANTLVFLPYLLVIAVIYSIPVYFLVGLCASWISFAYFVLVIWLIVLMANSFVLFLSSIAPNYIAGTSLMTVLLAAFFLFSGYFISKESLPKYWLFMYFFSMYKYALDALLINEYSCLITRCFIWYEENDGECMVTGGDVMNKRGLSEAQRWINVYALLGFFVLYRVLCLFVLIRRVSRSKS 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2026 600 MobiDBLite consensus disorder prediction 288 307 - -
Lele06g2026 600 Pfam ABC-2 type transporter 324 533 IPR013525 GO:0016020|GO:0140359
Lele06g2026 600 MobiDBLite consensus disorder prediction 292 307 - -
Lele06g2026 600 Gene3D - 41 290 IPR027417 -
Lele06g2026 600 SMART AAA_5 63 243 IPR003593 -
Lele06g2026 600 FunFam ATP-binding cassette transporter 43 259 - -
Lele06g2026 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 256 IPR027417 -
Lele06g2026 600 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 585 - -
Lele06g2026 600 Pfam ABC-2 type transporter 223 290 IPR043926 GO:0140359
Lele06g2026 600 Pfam ABC transporter 54 193 IPR003439 GO:0005524
Lele06g2026 600 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 266 IPR003439 GO:0005524
Lele06g2026 600 ProSitePatterns ABC transporters family signature. 165 179 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2026 Lele-ChrLele06 15726675 15728477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2026 47 260 Calmodulin-binding Proteins AT2G36910 28.216 4.30e-18 86.7