Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2019 ATGTGGTTCATCAAGGTGTTGTTTCTCATTCCATTAACAGTCATGGGAAAAGAAGCTGAAGCTCAATCCCTACCTGGTTGCCCCGACAAATGTGGAAATGTCAGTATTCCATATCCATTTGGTGTCGGTAAAAATTGTTTCCCGCAGGGCGAGAATCGGTTTAATCTCACATGTCAGAACTCTACCTTATACACCGGAAACGTCAAGTGTTCTAATATATCCCTCCAAGGTCATATGGATGTGTTCATGTCTGTGGCTTATCAATGTTTCAATGAATCAGGAGTTGCAGATGTTAAGCTATCTACTCTTACAATGGGTGCATCTTTCACTGTTTCTAGCATAGCAAACAACTTCATGAATGTCGGTTGTGACACATACGGCTACCTGAATAGTTTCGTTAACAATACTGTTTATTCCACCGGCTGTTTATCGCGGTGTTGGACACTTCAGAGCCAGATGTATGCTAAAAATAATTCAGGGATTGGGTTTTGCCAAGTGAATATTCCCACTGGAATGAGGAATATCAGTTTTAATGCAAATAGCTTCAATAACCACACGAATGTGTCGAGATTCAACAATTGTAGCTATGCATTTGTTGCCAAAAAGGACTGGTATAATTTCTCCTTTGAGCATCTAAAGCACTTCCCCTTTAACGAGTCATTGCTTGTGCTAAATTGGACAGTTTCAAATGTTACTTGTGATGTTGCTTTGAGAAGACCACACTATGCATGTACAAATCACACCCAGTGTGTGGATTCTCCTGATGGATTTGGATACAATTGCAAATGCGATAAAGGTTTCGATGGAAACCCTTACCATCCTGATGGATGTCATGATATAGACGAATGTAGTCAGGATCATTCAAAGAACAATTGCAGCGTTATGGAATCTTGTGTCAACACTCTTGGGGGTTTTCAATGCAAACCAAAAACAAATCTATATACAAGGATCATCATAGGTACTAGTGTAGCCTTAGTCGCTTTGGTTGTTAGCGTGTCTTGGCTATACTTGTTACACCAAAAGAGGAATCTCATCGAGCAAAAAGAAAAATATTTTCAACAAAATGGTGGCTTGATCTTGCAACAACGACTTTCAGTTAAAGAAGCTTCCTCCCAAACAGCTAAAATCTTCACCAAGGAGGAGTTAAAAAGAGCAACCAACAACTATGATGATAGCTTAATCATTGGCAAAGGAGGATATGGAACTGTTTATAAGGGATTCCTCAAAGACAACAAAGTTGTCGCCATCAAGAAGTCCAAACTTGTGGATCAAAACCAAATTGAACAGTTCATCAACGAGGTTGTTATCCTCTCACAAATAAATCATAAGAACGTGGTGAAGCTACTTGGATGTTGTTTGGAAACTGAAATTCCTTTGTTAGTTTATGAGTTTATCAACAATGGCACGCTTGATGCTTACATTCATCCCAGCCAAGACACGGCTTCTTCAAAGATATCTTGGGAAACACGTTTGAAGATAGCAGCAGAGACAGCAGAAGCACTATCATATTTGCACTCTAGTGCCTCCATACCCATAATCCATAGAGATTTCAAGCCCTCTAACATACTTTTAGATGAAACCTACACAGCCAAAGTGTCCGATTTTGGAGCTTCGAGGTTGGTTCCACTTGACGAAACAGAATTAGCCACAATGGTACAAGGAACTCTTGGATACTTGGATCCAGAATATTTGCAAACGAACCAACTATCCGACAAAAGCGACGTTTACAGTTTTGGAGTGGTGCTTGTAGAGCTACTAACAGGGAAGCGAGCTCTTTCATTTGATAAACCAGAAGAGGAAAGATGCCTTGCCATGCACTTCCTTTCATGCTTGAAGAAAGGCCAATTGTTTGAAGTACTTGAAGTTGGCATAGTGAATGATGAAAATAAGGAGATGTTAAGGGAAGTGGCTTCACTTGCTAAGAGATGCTTAAGACTTAGAGGAGATGAGAGACCTAGCATGAAAGAAGTTGCAATGGAGTTAGAGGGAATAAGGATCGCAAGGAACAAGCATTCATGGGTAAACAATGAAAATAATTCAGAAGAAATTCAACCATTATTGGTTGGGGAGACATGTGGTATTAGTGAAAGTGGGGATAGCATCAGTTGTAGAAACACAGGAGGATATAGTATCACAGATCATGTGTTGACTGACTTAAATGATGGAAGGTGA 2172 0.3992 MWFIKVLFLIPLTVMGKEAEAQSLPGCPDKCGNVSIPYPFGVGKNCFPQGENRFNLTCQNSTLYTGNVKCSNISLQGHMDVFMSVAYQCFNESGVADVKLSTLTMGASFTVSSIANNFMNVGCDTYGYLNSFVNNTVYSTGCLSRCWTLQSQMYAKNNSGIGFCQVNIPTGMRNISFNANSFNNHTNVSRFNNCSYAFVAKKDWYNFSFEHLKHFPFNESLLVLNWTVSNVTCDVALRRPHYACTNHTQCVDSPDGFGYNCKCDKGFDGNPYHPDGCHDIDECSQDHSKNNCSVMESCVNTLGGFQCKPKTNLYTRIIIGTSVALVALVVSVSWLYLLHQKRNLIEQKEKYFQQNGGLILQQRLSVKEASSQTAKIFTKEELKRATNNYDDSLIIGKGGYGTVYKGFLKDNKVVAIKKSKLVDQNQIEQFINEVVILSQINHKNVVKLLGCCLETEIPLLVYEFINNGTLDAYIHPSQDTASSKISWETRLKIAAETAEALSYLHSSASIPIIHRDFKPSNILLDETYTAKVSDFGASRLVPLDETELATMVQGTLGYLDPEYLQTNQLSDKSDVYSFGVVLVELLTGKRALSFDKPEEERCLAMHFLSCLKKGQLFEVLEVGIVNDENKEMLREVASLAKRCLRLRGDERPSMKEVAMELEGIRIARNKHSWVNNENNSEEIQPLLVGETCGISESGDSISCRNTGGYSITDHVLTDLNDGR 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2019 723 Gene3D Phosphorylase Kinase; domain 1 354 464 - -
Lele06g2019 723 Gene3D Laminin 281 315 - -
Lele06g2019 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 512 524 IPR008271 GO:0004672|GO:0006468
Lele06g2019 723 ProSiteProfiles Protein kinase domain profile. 389 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2019 723 ProSitePatterns Protein kinases ATP-binding region signature. 395 418 IPR017441 GO:0005524
Lele06g2019 723 Pfam Wall-associated receptor kinase galacturonan-binding 27 77 IPR025287 GO:0030247
Lele06g2019 723 Pfam Calcium-binding EGF domain 279 308 IPR001881 GO:0005509
Lele06g2019 723 Gene3D Laminin 232 280 - -
Lele06g2019 723 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 18 673 IPR045274 GO:0007166
Lele06g2019 723 SUPERFAMILY Protein kinase-like (PK-like) 369 662 IPR011009 -
Lele06g2019 723 Pfam Protein kinase domain 392 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2019 723 FunFam Wall-associated receptor kinase 2 465 685 - -
Lele06g2019 723 ProSitePatterns Calcium-binding EGF-like domain signature. 279 307 IPR018097 GO:0005509
Lele06g2019 723 FunFam Wall-associated receptor kinase 2 359 464 - -
Lele06g2019 723 CDD STKc_IRAK 395 664 - -
Lele06g2019 723 Gene3D Transferase(Phosphotransferase) domain 1 465 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2019 Lele-ChrLele06 15484633 15488619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2019 1 723 Receptor kinase-like Gene Family AT1G21230 42.497 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Lele06g2019 Pkinase 4.1e-52 CL0016