LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele06g2001	ATGGGCAGCTTGAACCAGAACGTTGTCTCCAGTATGACTAAGAAACCAACAATGAGCATGTTTTTCCTCTTACTCTTCCTAATCCTTTTCTGTATCGGCGTAACCTCCTACACTCCTGTTGATAACTTCTTAGTCAACTGCGGTGCCTCCGGCAATTCTCCTTCTTTAGGTGGCGGCCGGAACTGGACTGGAGACAAAGACTCCACACGATTCTCTCCGATCGAATTCTCCAACAGCAACAACTCCTCATTTATTCGCCTTTATTTTTACCCATCTTCCTACGATGACCTCAACTTCCTCCGCTCCGACTCTTTCTTCTCCGTCAGAGTAGGATCTCACATTCTTTTGAAAGACTTCAATGCTTCAATAATCGCCGATGACGACGCCGGTGAAGAAACCATTTTAAGAGAGTACTGCGTCAACATTTGTGACCCTAGTGAAGGGCTTAGCATAACCTTCACGCCCAACCCATCTCATCCAAACGCCTATGTTTTCGTCAATGGCATCGAAGTCGTCTCTATGCCGACGTTTCTTTACTACACCAAACCTGATGATCTTCAGTCTATGTTGTTAAATGGCGGAACCCAACAGTATCCGGTCAAAAACAATAGAGCTCTTGAGACGGTGTACAGAACCAATGTTGGTGGGGCCCGGATTCCTAGCGAAAATGATACCGGCATGTTTCGTTATTGGGACCAGGATATTGCCTACTTGGAGAGCAGGGAGCGACCAGATAGTGTATCAGCAGGTTTTGATTTAAAGCCAATCTACAGGGATGATCAAAATTATTTTGCACCTGATGCAGTATACATGACTGTCCGAAACTATGGGATGAAAGAAACATCCAAATTTAATGTGACTTGGGAGTTTCATGTGGATTCAGGGTTTACTTATATGGTGAGATTGCATTTTTGTGAGTTCGATGAAAAAATTGAAAAAGTTGGAGGAAGAGTTTTTCAAATCTTCATAAATGATGTTTTGGTGGAGCCTGTTGCCGATGTGATGTTGTGGACTCAGAGACTGGTTCCAGTTCATAGGGACTATGCCGTGCCGATGCCTAGACATGGAAGCTTGAAGGAGCTGAATCTTTCAATTAAGTTGCAACCACACCCAACCGTAAGAAGCATTTACAGAGATGTTTTATTGAATGGTATTGAAATTTTTAAAATAAGTGACTTCAGAAACAATCTCGGAGGTTCTAATCCCGATCAACGTCCTTCTCCCTCAGTATTGCTTCCAAAGGTATCTAACAAGAATCCACCAAAAATGAGAGTAATTTCCATAGTTGTGGGGTCAGCTTCTGGCTTCATTCTGCTATCTCTCATCATTTTGCTTACTTATTGTCGATTGGCTAGAGCTGCAATCAACGAAGGAAATTCACAGTGGGGACGAAAACCAGAATCGACGTCAAAAGCAAACAACTCGTCAACTTCGTCACCATCATTTGGGGCAAAGCATGCAATCATTCATCGAGACGTCAAGTCAACAAACATCTTGATAGATCAAAACTGGACGGCTAAGATTTCGGATTTCGGACTATCCAAAGTAGGACCAGCTGGTATTTCGAGATCTAACATTAACATAAGCACATTAGTGAAAGGAAGCATTGGATATTTGGATCCAGAATACTACACAGTTCAAATATTGACGGATAAGTCAGACGTGTACTCATTCGGAGTTGTGTTGCTTGAGGTATTATGTGGGAGGGCTCCTATTCTCCTCGCGGTGGAGAGGGAGAGGCAAAACCTTGTAGAGTGGTTTCGTATAAGTTTTGATAAGAATGAGATTTATGAGACGGTTGATCCAACCTTGAGGGAAAGCATGACGCCAGAATGCTTAATGGCATACACTGAGATTGCATTGAAATGCTTAGCAAATAAGGGGAATGATCGGCCATCCATGGGTGATGTAATGTTGGGCCTCGAGTCTCTGATGGAGACGATGAACAATGTAGAGAAGACAAAGCTTGGTGTGACGACCATAAATGAGGAGATTATTGTTGAAGAAGGATCAGTATTCAACGGGTGA	2028	0.43	MGSLNQNVVSSMTKKPTMSMFFLLLFLILFCIGVTSYTPVDNFLVNCGASGNSPSLGGGRNWTGDKDSTRFSPIEFSNSNNSSFIRLYFYPSSYDDLNFLRSDSFFSVRVGSHILLKDFNASIIADDDAGEETILREYCVNICDPSEGLSITFTPNPSHPNAYVFVNGIEVVSMPTFLYYTKPDDLQSMLLNGGTQQYPVKNNRALETVYRTNVGGARIPSENDTGMFRYWDQDIAYLESRERPDSVSAGFDLKPIYRDDQNYFAPDAVYMTVRNYGMKETSKFNVTWEFHVDSGFTYMVRLHFCEFDEKIEKVGGRVFQIFINDVLVEPVADVMLWTQRLVPVHRDYAVPMPRHGSLKELNLSIKLQPHPTVRSIYRDVLLNGIEIFKISDFRNNLGGSNPDQRPSPSVLLPKVSNKNPPKMRVISIVVGSASGFILLSLIILLTYCRLARAAINEGNSQWGRKPESTSKANNSSTSSPSFGAKHAIIHRDVKSTNILIDQNWTAKISDFGLSKVGPAGISRSNINISTLVKGSIGYLDPEYYTVQILTDKSDVYSFGVVLLEVLCGRAPILLAVERERQNLVEWFRISFDKNEIYETVDPTLRESMTPECLMAYTEIALKCLANKGNDRPSMGDVMLGLESLMETMNNVEKTKLGVTTINEEIIVEEGSVFNG	675

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele06g2001	675	Gene3D	Transferase(Phosphotransferase) domain 1	481	665	-	-
	Lele06g2001	675	SMART	serkin_6	372	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele06g2001	675	FunFam	FERONIA receptor-like kinase	204	391	-	-
	Lele06g2001	675	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	488	500	IPR008271	GO:0004672\|GO:0006468
	Lele06g2001	675	ProSiteProfiles	Protein kinase domain profile.	308	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele06g2001	675	MobiDBLite	consensus disorder prediction	460	482	-	-
	Lele06g2001	675	SUPERFAMILY	Protein kinase-like (PK-like)	486	639	IPR011009	-
	Lele06g2001	675	MobiDBLite	consensus disorder prediction	461	482	-	-
	Lele06g2001	675	Pfam	Protein tyrosine and serine/threonine kinase	484	638	IPR001245	GO:0004672\|GO:0006468
	Lele06g2001	675	Gene3D	-	73	175	-	-
	Lele06g2001	675	Gene3D	-	204	391	-	-
	Lele06g2001	675	PANTHER	OS03G0124300 PROTEIN-RELATED	20	82	-	-
	Lele06g2001	675	Pfam	Malectin-like domain	80	390	IPR024788	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele06g2001	Lele-ChrLele06	15192799	15195104	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele06g2001	483	658	Receptor kinase-like Gene Family	AT3G51550	50.568	2.00e-51	190

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lele06g2001		Malectin_like	3.3e-28	CL0202