Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1996 ATGCTCTCTCAACTTCGTGACCATCATTTGGTATCTCTCATTGGTTTCTGCAACGATGACGACGAGATGATCCTCGTCTACGAGTTCATGGCTCGTGGAACCTTTCGTGAGCATCTTTATGATTCTGAGAACCAACCACTTTCATGGAATCAAAGGCTGGAGATTTGCCTAGGTGCTGCACGGGGACTGCATTACCTACATACAGGGGCAAAGCATGCAATCATTCATCGAGACGTCAAGTCAACAAACATCTTGATAGATCAAAACTGGACGGCTAAGATTTCGGATTTCGGACTATCCAAAGTAGGACCAGCTGGTATTTCGAGATCTAACATTAACATAAGCACATTAGTGAAAGGAAGCATTGGATATTTGGATCCAGAATACTACACAGTTCAAATATTGACGGATAAGTCAGACGTGTACTCATTCGGAGTTGTGTTGCTTGAGGTATTATGTGGGAGGGCTCCTATTCTCCGCGCGGTGGAGAGGGAGAGGCAAAACCTTGTAGAGTGGTTTCGAAGAAGTTTTGATGAGAATGAGATTTATGAGACGGTTGATCCAACCTTGAGGGAAAGCATGAAGCCAGAATGCTTAATGGCATACACTGAGATTGCATTGAAATGCTTAGCAAATAAGGGGAATGATCGGCCATCCATAGGTGATGTAATGTTGGGCCTCGAGTCTCTGATGGAGACGATGAACAAGGTAGAGAGGACAAAGCTTGGTGTGACGGCCATAAATGAGGAGATTATTGTTGAAGAAGGATCAGTATTCAACGGGTGA 786 0.4427 MLSQLRDHHLVSLIGFCNDDDEMILVYEFMARGTFREHLYDSENQPLSWNQRLEICLGAARGLHYLHTGAKHAIIHRDVKSTNILIDQNWTAKISDFGLSKVGPAGISRSNINISTLVKGSIGYLDPEYYTVQILTDKSDVYSFGVVLLEVLCGRAPILRAVERERQNLVEWFRRSFDENEIYETVDPTLRESMKPECLMAYTEIALKCLANKGNDRPSIGDVMLGLESLMETMNKVERTKLGVTAINEEIIVEEGSVFNG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1996 261 PIRSF ILK 1 246 - -
Lele06g1996 261 PANTHER OS07G0166700 PROTEIN 1 232 IPR045272 GO:0004714|GO:0006468
Lele06g1996 261 Gene3D Transferase(Phosphotransferase) domain 1 31 251 - -
Lele06g1996 261 SUPERFAMILY Protein kinase-like (PK-like) 1 225 IPR011009 -
Lele06g1996 261 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1996 261 FunFam Receptor-like protein kinase FERONIA 30 248 - -
Lele06g1996 261 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Lele06g1996 261 Pfam Protein tyrosine and serine/threonine kinase 1 223 IPR001245 GO:0004672|GO:0006468
Lele06g1996 261 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g1996 261 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1996 Lele-ChrLele06 15020681 15021466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1996 1 244 Receptor kinase-like Gene Family AT3G51550 54.918 1.95e-92 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele06g1996 PK_Tyr_Ser-Thr 1.7e-38 CL0016