Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1961 ATGAAAGTTCTTGAAGTTGGCCCGGTGGCACCCCCGCCGGCAACAACCACGTCCACCGCCACGTCGGAAATCTCCCTACCGCTCACGTTTTTCGACGTACTGTGGTTGAGATTCCCGCCGGTGGAGCGTCTTTTCTTCTACGAATTCCCAAACCCACCTTCGTCCTTCTTCCATTCCCTTCTTCCAAAACTTAAACATTCCCTCTCTCTCACTCTCCGTCACTTTCTTCCTCTCGCCGGAAACATCGTATGGCCACCTCACTCCCCAATTCCCTTCATCCGTTACGTCTCCGGCGACGGCGTCTCCCTCACCATTGCTGAATCCGACTCCGATTTCGACCATCTTTCTGGTTCCGACTTCCCTGAAGCCAAGGAAATCCGCCTGTTGGTACCCCACTTGACCGTTTCTGATGAGAAAGCTCCTCTCATGAGTCTGCAGATCACTCTGTTTCCGAACTCTGGGTTCTCTCTTGGAATCGCCACCCACCACGCAACCATGGACGGAAAATCATCAACTTTGTTTCTAAAATCATGGGCTTATCTCTGCTCCAATCTCCAAGAATCATCATCATTGTCATCATCGGTTTCATCGTTACCGGAGAATCTAATACCATCCTTTGACAGATCAGTAATCATAGATCCGTCTGGTATTGCTAAGAAATTCGCGAATTTTTACTTAAAGCAAGGTGGACCAAACAACAGAAGCTTGATGTTATGGGACATGCACAAGTCAGATCAAGGAAAGCTCATAAGGGGAACATTTGAATTACTTCCTTCGAATATTCAAAAACTTAAGAAATCTGCAGAAATAAAGCTGAAGAAGAAGGTTCATCTATCAACCTTCTCAGTAACATGTGCCTATATGATAAACTGCTTGGTCAAATCAGAACAAACAAAACAGGAGAAAGTGTTGTTCATATTCAGTGCGGATTGTAGGTCTCGTTTGGATCCTCCGATTCCATCTTCATATTTTGGAAACTGCATTGGCGGGGTTAAGGTTGAGGATGAAACGAAGAACTTGTTAGAAGATGATGGGTTCATCGTTGCCCTTGAAGCCATAAGTGAAGCTTTGAAGAGATTTCAAGATGAAGAGATATTAAGTGCAGCAGAAACATGGATTTCCGATATGGAAACTTTTGGATTGACTGATACTTACAGAATGTTTTCAATTGCAGGATCACCGAGATTTGATGTTTATGGTAATGATTTTGGATGTGGAAGGCCAAAGAAGGTGGAGATAGTTTCTATAGATAAGACTGGAGCTTTTTCTCTTGCAGAAAGTAGGAATGGTAATGGATGTATTGAGATTGGGTTGGTGTTGAACGAAACTCAAATGGAAGCTTTTTCTGCTGTTTTTCTCAAAGGTCTTTCTTCTTCCTGA 1380 0.4384 MKVLEVGPVAPPPATTTSTATSEISLPLTFFDVLWLRFPPVERLFFYEFPNPPSSFFHSLLPKLKHSLSLTLRHFLPLAGNIVWPPHSPIPFIRYVSGDGVSLTIAESDSDFDHLSGSDFPEAKEIRLLVPHLTVSDEKAPLMSLQITLFPNSGFSLGIATHHATMDGKSSTLFLKSWAYLCSNLQESSSLSSSVSSLPENLIPSFDRSVIIDPSGIAKKFANFYLKQGGPNNRSLMLWDMHKSDQGKLIRGTFELLPSNIQKLKKSAEIKLKKKVHLSTFSVTCAYMINCLVKSEQTKQEKVLFIFSADCRSRLDPPIPSSYFGNCIGGVKVEDETKNLLEDDGFIVALEAISEALKRFQDEEILSAAETWISDMETFGLTDTYRMFSIAGSPRFDVYGNDFGCGRPKKVEIVSIDKTGAFSLAESRNGNGCIEIGLVLNETQMEAFSAVFLKGLSSS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1961 459 Pfam Transferase family 18 449 - -
Lele06g1961 459 Gene3D - 1 232 IPR023213 -
Lele06g1961 459 PANTHER - 1 458 - -
Lele06g1961 459 SUPERFAMILY CoA-dependent acyltransferases 94 191 - -
Lele06g1961 459 Gene3D - 247 458 IPR023213 -
Lele06g1961 459 SUPERFAMILY CoA-dependent acyltransferases 274 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1961 Lele-ChrLele06 14476196 14477575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1961 44 448 Monolignol Biosynthesis Gene Families AT5G48930 25.899 4.92e-19 87.4