Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1955 ATGGCCTCTCCCAATAGCTCTCTGAAACTACATGAGCTCTGCAGAGTTGCTCCGCCGCCATCTTCACCAAAGTCCCCTTTCCCTCTCACCTTCTTCGACTTGTTTTGGCTCAGATATCATCCTGTTGAACGTCTCTTCTTCTTCTCTCTCCCTCACTTAAACCCTTCATCCTTCTTCGACTCCATCGTCCCTAACCTCAAATGCTCCCTCTCTCTCACTCTGCAACACTTTCTTCCTCTCGCTGGAAACATCGTTTGGCCCTCCGACTCCGTCAAGCCCATCATTCAATACACTCATGGAGATGCCGTCTCTCTCGCCATAGCTGTTTCTGATTCTGATATGAATACTCTCTTAGATAAGTCACCTTGTGACGCCTCGCAATCTCGTGCTTTTGTGCCCAACTTGGATTCGTCCGATTCATCTGCTTCGGTTCTTTCTCTGCAAATCACCCTGTTTCCCTACAGTGGATTTTGCATAGGCTTGAGCTCACACCATGCCGGTTTGGATGGGAAATCATCAATTATGTTCATCAAGGCCTGGGCTTATCTATGTCGAACTGAATCTGACAACGAATCTTCCAGTTTGATTCCTCAAGAAATGCAACCATTCTTGGACAGGGAAGTTATCATCGATCCACGCGGCATTGAAGCTGCATACATTAATGCGTGGTCAAGTTTAGATCCCGCTCAGGATCAGAAGAACCAACCAAGCTTGAAGATTTTGTCCGACCTGTTCCGGCCGAAAGTGAAAGACTCGGCTCGAGCCACGTTCGAGCTCAAACGTGGAGATCTAAACAAGATAAAGGAAATGGTGTTGCAGAAGTGGGAGAATAATGAGACAAAAGAAGAAAGAGAAGACTCGATTACACTTTCAAAGCCTCCAAATTTGTCAACCTTTGTGCTTACAACTGCTTATGTTCTGGTCTGCATCGCCAAAGCCATTGAAAGAAGTGAAAATAAGAGAAAGAAACTGTTCTTCAGCTTCACAGCTGATTGTAGGGCAAGGTTAGATCCTCCAATCCCAGAAAACTGCTTTGGTAATTGCGTGATGCCTCAGATAATCGAAACACAACCAGAAGACTCCACAGAAAATGATGGGATTGCCATCGTTGCTAAGAAAATACACAGAACGGTAAGCAAAATACAGAAAGAGAAGAATGAAGTGCTTGAAGGAGCAGAGACACTAATTTCTAGGTTTTCTTTGGAATCTGTAGAAGGAATTGAAGTTCAGTACATAGGAGTTTCCGGGTCCACCCGTTTCAGAGTTTATGACACTGATTTTGGGTGGGGAAGGCCTGAGAAGGTGGAGATAACTTCAGCGGACAGAAATATAACAATGGCGATGGCAGAGAGTAAAGAAGGTGATGGTGGGGTTGAAGTGGGAATCGTACTGAAGAATCAAGTGATGGATCAATTTGCTTCCTTGTTTCGAACTGAGATGGAGTCTTTTGGATCTGTTGGATGTGATTTGCAGAGAGGAAGGATTAAGAAAAAAGTGGGTTAA 1503 0.4471 MASPNSSLKLHELCRVAPPPSSPKSPFPLTFFDLFWLRYHPVERLFFFSLPHLNPSSFFDSIVPNLKCSLSLTLQHFLPLAGNIVWPSDSVKPIIQYTHGDAVSLAIAVSDSDMNTLLDKSPCDASQSRAFVPNLDSSDSSASVLSLQITLFPYSGFCIGLSSHHAGLDGKSSIMFIKAWAYLCRTESDNESSSLIPQEMQPFLDREVIIDPRGIEAAYINAWSSLDPAQDQKNQPSLKILSDLFRPKVKDSARATFELKRGDLNKIKEMVLQKWENNETKEEREDSITLSKPPNLSTFVLTTAYVLVCIAKAIERSENKRKKLFFSFTADCRARLDPPIPENCFGNCVMPQIIETQPEDSTENDGIAIVAKKIHRTVSKIQKEKNEVLEGAETLISRFSLESVEGIEVQYIGVSGSTRFRVYDTDFGWGRPEKVEITSADRNITMAMAESKEGDGGVEVGIVLKNQVMDQFASLFRTEMESFGSVGCDLQRGRIKKKVG 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1955 500 Pfam Transferase family 15 474 - -
Lele06g1955 500 PANTHER - 8 482 - -
Lele06g1955 500 Gene3D - 249 483 IPR023213 -
Lele06g1955 500 Gene3D - 8 235 IPR023213 -
Lele06g1955 500 SUPERFAMILY CoA-dependent acyltransferases 281 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1955 Lele-ChrLele06 14352234 14353736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1955 33 472 Monolignol Biosynthesis Gene Families AT5G48930 24.342 1.03e-21 95.9