Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1948 ATGGCTCCGAAACAGCCGAGTACGGGTTTATTCGTTGGATTGAACAAGGGTCACGTTGTGACCAAGAAGGAGTTGGCTCCACGCCCGTCAGATCGCAAAGGGAAAACCAGCAAGAGGGTACACTTTGTAAGGAGTCTTATCCGTGAAGTTGCTGGCTTTGCTCCATATGAGAAGAGGATTACAGAGCTTTTGAAGGTTGGTAAGGATAAGAGAGCATTGAAAGTTGCCAAGAGAAGGTTGGGTACCCACAAGAGAGCAAAGAAGAAGCGTGAGGAGATGTCGAACGTGCTCCGAAAGATGAGGTTGGGCTATGTTCTCGTCTTGATGGCTGGTGGAGCTGGGGACAAAAAGAAGTAA 357 0.4846 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRRLGTHKRAKKKREEMSNVLRKMRLGYVLVLMAGGAGDKKK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1948 118 PANTHER 60S RIBOSOMAL PROTEIN L36 1 109 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele06g1948 118 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele06g1948 118 Gene3D 60S ribosomal protein L36 1 103 IPR038097 -
Lele06g1948 118 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele06g1948 118 FunFam 60S ribosomal protein L36 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1948 Lele-ChrLele06 14267682 14268807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1948 1 118 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 76.271 5.51e-56 168