Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1919 ATGGGGTTTAATGGTTTAATTAGGAGCAATAGTAGAAACTACAGCTGTGGGAGTGCAAGAGTTGTGGCTGATATTTCTCCACACAATCTCTATATCCCTAGTGGTTCCATTGTTGAGCAACCTCTTCATTCTCCACCTATTTTAACTCAGAAAATGGAGGGCCATGGTGGTGATATGGGTCTTATTGGGGAATTTGATCATAGTTTTATGGGTAGGATGAGGGATGATGAGTATGAGAGTCGGTCCGGAAGCGATAATTTCGAAGGAGTTTCCGGCGACGATCACGACGCCGCCGGTGAAGATCAGCCTCGGGCAGGAAGAAGAAAGAAATATCACAGACATACTCCTCATCAAATTCAAGAGCTCGAATCATTTTTCAAGGAGTGCCCTCATCCTGATGAGAAGCAGAGGATGGAACTTAGTAAGAGGCTGGGCTTGGAGAATAAACAGATCAAGTTCTGGTTTCAAAATAGAAGAACTCAAATGAAGACTCAATTGGAACGGCACGAGAATATAATTCTCAGACAAGAGAATGACAAACTTCAGGCTGAGAATAGTATGATAAAGGAAGCAATGGCCAACCCAATGTGTAACAGATGTGGTGGCCCGGCTATTCCTGGTCAAATTTCATTTGAGGACCACCATCTCAGAATTGAAAATGCTCGGCTTAAGGATGAGTTGAATCGGATATGTTCCTTGGCAAACAAGTTCCTCGGTAGGCCACTCTCATCATTGGCCTGCCCCACTGCTGTTATGGGTTCGAATTCTGGTCTTGAACTAGCTATAGGAAGGAGTGAAATTGGCGGCTCGAGTGCTCTAGGTTCTTCCCTGCCAATGGGGCTTGACTTAGGGGAAGGTATTATGGGCGCACATTCGGCAATGCCTCGAATTAGATCGCCGATGGGAACGATGGGGGGTGAAATTCAGGTTGATAGGTCTATGCTCATCAATCTCGCGCTGTCTGCTATGGAGGAATTAATGAAGATGGCTCAGGCAGATAACCCTCTCTGGATTAAGTGTTTGGGTGGTGAGAAAGAGATTCTGGACCATGAGGAGTATGACAGGATAATTTCTCCTTGTATCAGCCCAAAACCTGCCGGTTTTGTAACCGAAGCTACAAGGGAAACCGGGATAGTCATCATAAACAGTCTAGCCCTCATGGAGACATTGATGGACGCGAACCGGTGGGCGGAGATGTTTCCCTCGTTGATAGCTAGAGCTGCGACTGTTGAAGTAATATCGAATGGTATGGGTGGAACCAGAAATGGTGCTTTGCAAGTGATGCATGCTGAGGTTCAATTGCTCTCGCCTCTCGTCTCTGTGCGTCAATTGAGATTTCTGCGGTTTTGCAAGCAGCATACAGAAGGCGTGTGGGCTGTAGTCGATGTTTCAGTCGAGATTGGCCATAGTTCGATCGATGGCCACCCGTTCGTGAGCTGTAGGAGGCTTCCTTCGGGCTGTGTTGTGCAAGACATGCCCAACGGTTACTCTAAGGTTACATGGGTTGAGCATACACAATATGATGAAAGTGGTGTTCACCAACTGTACCGGCCGTTGGTGAATTCTGGCTTTGGCTTTGGCGCTCTTCGGTGGATTGCCACCCTTCAAAGGCAATGTGAATGCTTGGCAATCCTCATGTCCTCTTCTATACCCAGTGAGGATCATACAGCATTAAGCCAAGCTGGTCGGAGAAGCTTGTTGAAGCTGGCGCAGCGCATGACGAATAATTTCTGTTCCGGGGTTTGTTTATCGTCCGCACGCAAGTGGGACAGCCTTCACATTGGCACTCTTGGTGATGATGTGAAAGTGATGACCCGGAAGAACGTGGATGACCCTGGTGAGCCTCCTGGGATTGTGCTGAGTGCCGCGACTTCTGTTTGGGTTCCGGTGTCCCAGGAGAATCTGTTCAATTTCGTGCGTGACGAACGGTTGAGAAGCGAGTGGGACATTTTGTCGAATGGGGGACCGATGCAGGAGATGGTCCATATTGCCAAAGGTCAAGGTTCAGGGAATTGTGTGTCTCTACTTCGTGCCAGCGCTGTGAATCCCAAGGAGAGCAACATGGTCATTCTGCAAGAGACATGGACCGACCCGTCGTGCTCGGTGGTGGTGTACGCGCCGGTCGACGTGCAATCCTTGAACGTAGTAATGAGCGGCGGAGACTCCGCCTATGTGGCTCTCTTGCCTTCAGGTTTCGCCATTCTCCCGGACGGCCGCCAATCCAGCTTCGGTGGCAGCGGTCTACTCAAAGGTGGCAGCCCCGACGGTGACCACCAAGGAAGCCTCCTCACGGTCGGGTTCCAGATTCTGGTAAACAGTCTGCCGACGGCGAAACTCACGGTGGAGTCGGTCGAGACGGTGAACAACCTCATCTCGTGCACCATTCAGAAGATCAAAAGCGCCCTGGGAGTTGCATGA 2418 0.4967 MGFNGLIRSNSRNYSCGSARVVADISPHNLYIPSGSIVEQPLHSPPILTQKMEGHGGDMGLIGEFDHSFMGRMRDDEYESRSGSDNFEGVSGDDHDAAGEDQPRAGRRKKYHRHTPHQIQELESFFKECPHPDEKQRMELSKRLGLENKQIKFWFQNRRTQMKTQLERHENIILRQENDKLQAENSMIKEAMANPMCNRCGGPAIPGQISFEDHHLRIENARLKDELNRICSLANKFLGRPLSSLACPTAVMGSNSGLELAIGRSEIGGSSALGSSLPMGLDLGEGIMGAHSAMPRIRSPMGTMGGEIQVDRSMLINLALSAMEELMKMAQADNPLWIKCLGGEKEILDHEEYDRIISPCISPKPAGFVTEATRETGIVIINSLALMETLMDANRWAEMFPSLIARAATVEVISNGMGGTRNGALQVMHAEVQLLSPLVSVRQLRFLRFCKQHTEGVWAVVDVSVEIGHSSIDGHPFVSCRRLPSGCVVQDMPNGYSKVTWVEHTQYDESGVHQLYRPLVNSGFGFGALRWIATLQRQCECLAILMSSSIPSEDHTALSQAGRRSLLKLAQRMTNNFCSGVCLSSARKWDSLHIGTLGDDVKVMTRKNVDDPGEPPGIVLSAATSVWVPVSQENLFNFVRDERLRSEWDILSNGGPMQEMVHIAKGQGSGNCVSLLRASAVNPKESNMVILQETWTDPSCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGRQSSFGGSGLLKGGSPDGDHQGSLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKSALGVA 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1919 805 SUPERFAMILY Homeodomain-like 92 165 IPR009057 -
Lele06g1919 805 Coils Coil 159 194 - -
Lele06g1919 805 ProSitePatterns 'Homeobox' domain signature. 140 163 IPR017970 GO:0000981|GO:0006355
Lele06g1919 805 ProSiteProfiles 'Homeobox' domain profile. 105 165 IPR001356 GO:0003677
Lele06g1919 805 Pfam Homeodomain 108 163 IPR001356 GO:0003677
Lele06g1919 805 CDD homeodomain 108 165 IPR001356 GO:0003677
Lele06g1919 805 Gene3D - 94 180 - -
Lele06g1919 805 Gene3D - 317 541 IPR023393 -
Lele06g1919 805 SUPERFAMILY Bet v1-like 310 541 - -
Lele06g1919 805 Pfam START domain 318 541 IPR002913 GO:0008289
Lele06g1919 805 MobiDBLite consensus disorder prediction 76 113 - -
Lele06g1919 805 ProSiteProfiles START domain profile. 308 544 IPR002913 GO:0008289
Lele06g1919 805 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 105 802 IPR042160 -
Lele06g1919 805 SMART HOX_1 107 169 IPR001356 GO:0003677
Lele06g1919 805 FunFam Homeobox-leucine zipper protein GLABRA 2 317 540 - -
Lele06g1919 805 MobiDBLite consensus disorder prediction 76 106 - -
Lele06g1919 805 CDD START_ArGLABRA2_like 312 540 - -
Lele06g1919 805 SUPERFAMILY Bet v1-like 569 799 - -
Lele06g1919 805 SMART START_1 317 541 IPR002913 GO:0008289
Lele06g1919 805 FunFam Homeobox-leucine zipper protein HDG1 92 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1919 Lele-ChrLele06 13888953 13893906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1919 1 802 Homeobox Transcription Factor Family AT3G61150 55.690 0.0 888
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele06g1919 START 2.3e-47 CL0209