Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1915 ATGGGATTCCTCCGGCGACTCTTCGGCGCCAAAAAATCGGATCATTCCTCCGCTTCCTCCGGCAAGGACAAGAAGAAGTGGAGCTTCGGCAAAAGCAACAAGGACAAGTCTCACGGGTCTAAAACTAAAGGATCTGATCTCAACCACTTTGATTCCTCCACTACATTCTCCGACTCTTTAGATGCCAATAAGCATGCCATCGCTGTTGCGGCTGCCACGGCCGCCGTTGCAGAGGCCGCACTCGCCGCTGCCCATGCGGCCGCTGAGGTAGTCCGACTAACCAGTGGCGGTGGCGGAACCGTCACTCGACCGGTGGGCACGACACAGGCCAGCACTAGCCAACGCCGGTGGGTGGAGGAAGCGGCCGCCGTTAAAATACAGTCCGCTTTCCGGTCTTATCTGGCAAGGAGAGCACTACGAGCACTCAAAGCATTGGTGAAGCTGCAAGCACTGGTGAGAGGCCACATAGTGAGAAAGCAAACTGCGGACATGCTCAGGCGCATGCAAACATTGGTCAGACTGCAGGCTCGGGCGCGAGCAAGTCGCGCGCATGCGTCAGATTATCTGCATTCTAGCAAGTCTTCACTGTATTATCATCCTGTCCCCGAAGATCGTGAGCATCCACTCCGTGCCTATAGTACCAAATTTGATGGATCTTCCATCCTGAAGAGATGTAGCTCCAATGCAAATTTTAGGGAGATTGGCCCACAAAGAACACGGTTCGGATCACATTGGTTGGATCGTTGGATGGAAGAAAGTGTTTGGAGCAACCCAAGAGACGCTTCACTGAGAAATGTGCGCGCCGATGATGAGAAGAGTGACAAGATCCTTGAAGTGGACACATGGAAGCCACATTTCAGGTCTCACCGAAGTAGCAGCTCCTTCCACGCATCGCAATTCTACTTAGCTTCCGACTACGTCAACAACAACAACGAGATGGCATATGACTATCCATCGAAAGTCTCGGCGAAAGCTCTAAACCAAAGCCTCTCATCTCTGACCACCATGAAAATTCAGAAAGGAAAAGAAGTAGTATCAGCTTCAAGAACTTCTGAGAATAGCCCACAAGCACTTTCAGCTTCATCTAGAGCTGGAAGTTGTGGAGGTAGGAGAAACCATTTCACACCGACAAGGACTGAGTGTTCTTGGGGTTTCGTTGGCTATCCAAATTACATGGCAAACACAGAATCATCAAGAGCTAAGGTTAGATCTCAGAGTGCTCCTAAGCAAAGATTGGAGTTTGATAGATATAGTTCAAGTGGGAGAAGTGTTCAAGGCTTCTGGGATTCTTCAGATAGGGACGGAGATCTTAGGAACAGAGCATATCCAGCTTCAACACGCTCGAACAGAGTTGGGAGTACCAATTTAAGGTGA 1374 0.5015 MGFLRRLFGAKKSDHSSASSGKDKKKWSFGKSNKDKSHGSKTKGSDLNHFDSSTTFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGGGTVTRPVGTTQASTSQRRWVEEAAAVKIQSAFRSYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQARARASRAHASDYLHSSKSSLYYHPVPEDREHPLRAYSTKFDGSSILKRCSSNANFREIGPQRTRFGSHWLDRWMEESVWSNPRDASLRNVRADDEKSDKILEVDTWKPHFRSHRSSSSFHASQFYLASDYVNNNNEMAYDYPSKVSAKALNQSLSSLTTMKIQKGKEVVSASRTSENSPQALSASSRAGSCGGRRNHFTPTRTECSWGFVGYPNYMANTESSRAKVRSQSAPKQRLEFDRYSSSGRSVQGFWDSSDRDGDLRNRAYPASTRSNRVGSTNLR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1915 457 Pfam Protein of unknown function (DUF4005) 351 415 IPR025064 -
Lele06g1915 457 PANTHER IQ-DOMAIN 5-RELATED 13 429 - -
Lele06g1915 457 SMART iq_5 141 162 IPR000048 GO:0005515
Lele06g1915 457 SMART iq_5 118 140 IPR000048 GO:0005515
Lele06g1915 457 MobiDBLite consensus disorder prediction 344 371 - -
Lele06g1915 457 MobiDBLite consensus disorder prediction 399 457 - -
Lele06g1915 457 Gene3D - 119 171 - -
Lele06g1915 457 MobiDBLite consensus disorder prediction 399 427 - -
Lele06g1915 457 MobiDBLite consensus disorder prediction 442 457 - -
Lele06g1915 457 MobiDBLite consensus disorder prediction 8 45 - -
Lele06g1915 457 MobiDBLite consensus disorder prediction 1 48 - -
Lele06g1915 457 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Lele06g1915 457 Pfam IQ calmodulin-binding motif 121 140 IPR000048 GO:0005515
Lele06g1915 457 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Lele06g1915 457 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1915 Lele-ChrLele06 13831986 13835935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1915 1 426 IQD Protein Family AT5G07240 45.045 3.45e-67 220