Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1906 ATGTTGAGCCCTTCGCTCGTACATCCTCCATTGGAACAGTTTAGCATGAGCTCCTCGGTTCTCTACTCTCCTCCCACTCGCTTCTACTCTTTCATACCAACACTTTCTCTTTCCTCTCTCTCTCCCGTTATTCTTCAACTACCCCATCTTCCCTCTTCTTCCCTCTCCCTGCGAAGCAGAACTCTGTCAAAGACGATTACAACCCCACTTGCCTATGTGACCGGACCCGCATCCGACCCTATTTTCAGTGAGAGTGATCCTAGGATAGATGGGTCGGATCCCCGGCAGGAGAAAGTCCAGCCGCCCACCGTCATTAGCTGGGGTTTTCTCTGGATGCTTTTGATGAAACACAAACTGCGGCTTGTGGTTTCAGTTGTGACTCTAATTTGTTGCACCACTTGTACTCTTTCTATGCCCCTATTTTCTGGTGAGGAACGTGAGCTTCAGCTTCATGTGGAATTTTTTGACAAATACAAGGTTGGTGAACTCACCGGTTTGCTAACATCCGATTTGGGTTCTCTTAAAGATACTGTCATTGGGACAATAGGCATACTTTTTGCTTTATCACATCAACTTGCTCCAATTTTGGGTATCCTAATGCTCACAGTTTCTGTTTCAGTTGGTAATCCTCCCATGCCCACCTTTATTTTAGATGATATCAACTTAAGGCCAGGCTATTCCGGGCTGACATTTTATATTGTGGTGAGATCAACTCTGCCAGTATTTAAAGCACATGGATTGGTTCAAGCATCCATATCTGACTGTGTAGCAGAAACATTTTCTGCTATCCGTACAGTAAGATCCTTTGGTGGAGAGAAACGCCAAATGTTTACGTTTGCTAACCAGGGTGAACTCTCTGTTGGAACTGTGGCGTCTTTTATTGGATACACTTTCACATTAACTTTTGCTGTTCAAGGAATGGTTAATACTTTTGGAGATCTACGTGGAGCTATTGCTGCTGTTGAGAGGATCAACAATGTTTTTTCTGAGGTTCAAATTGATGAAGCCCTTTCTTATGGCTTAGAAAGAGAACTGAAACAGAAAGAATTAAATGATGATAACTATAAACTGTTCTTCTCTGATGATTCTACTGAGAAAAACCAACAAAAATACTTGCCATGCATGTCAGCATTTAAATCATCAAGCAATTTGTACAGCTTAGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTGTATTTCTCTTATCCCTTAAGGCCGGATGTGGAAATCTTACGTGGCTTAAATTTAACACTAAAATATGGAACTATAACTGCATTGGTGGGTCCTAGTGGTGCCGGAAAAAGTACAATAGTGCAGCTATTAGCTCGATTTTATGAGCCAACAAGAGGACATGTAACAGTTGCTGGAGAGGATGTTCGAACATTTGACAAGAGCGAATGGGCTCGGGCTGTCTCTATTGTTAATCAAGAGCCTGTTCTGTTTTCGGTGTCTGTTGGAGAAAATATTGCATATGGGCTTCCAGATGATAATGTTTCTAAAGAAGATGTGATCAAGGCAGCAAAAGCTGCAAACGCTCACGACTTCATATTTTCACTTCCACAGGGTTATGATACACTTGTTGGTGAGCGTGGAGACCTATTAAGCGGGGGACAGAGGCAGGCCACCAGTGCCTTAGATGCAGTTAGTGAGAGGTTGGTCCAGGATGCTCTCAACCAGTTGATGAAGGGGAGGACAACATTAGTGATAGCTCACCGATTGAGCACAGTTCAAAATGCCCATCAAATTGCACTTTGCTCTGATGGCAAGATTGCAGAACTAGGAACACACTATGAGTTGTTGGCTAAGAAAGGCCAATATGCTTCACTGGTTGGCACTCAAAGGGTTGCATTTGAATGA 1857 0.4313 MLSPSLVHPPLEQFSMSSSVLYSPPTRFYSFIPTLSLSSLSPVILQLPHLPSSSLSLRSRTLSKTITTPLAYVTGPASDPIFSESDPRIDGSDPRQEKVQPPTVISWGFLWMLLMKHKLRLVVSVVTLICCTTCTLSMPLFSGEERELQLHVEFFDKYKVGELTGLLTSDLGSLKDTVIGTIGILFALSHQLAPILGILMLTVSVSVGNPPMPTFILDDINLRPGYSGLTFYIVVRSTLPVFKAHGLVQASISDCVAETFSAIRTVRSFGGEKRQMFTFANQGELSVGTVASFIGYTFTLTFAVQGMVNTFGDLRGAIAAVERINNVFSEVQIDEALSYGLERELKQKELNDDNYKLFFSDDSTEKNQQKYLPCMSAFKSSSNLYSLAWSGDVCLEDVYFSYPLRPDVEILRGLNLTLKYGTITALVGPSGAGKSTIVQLLARFYEPTRGHVTVAGEDVRTFDKSEWARAVSIVNQEPVLFSVSVGENIAYGLPDDNVSKEDVIKAAKAANAHDFIFSLPQGYDTLVGERGDLLSGGQRQATSALDAVSERLVQDALNQLMKGRTTLVIAHRLSTVQNAHQIALCSDGKIAELGTHYELLAKKGQYASLVGTQRVAFE 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1906 618 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 148 282 - -
Lele06g1906 618 Pfam ABC transporter transmembrane region 148 274 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele06g1906 618 Pfam ABC transporter 411 543 IPR003439 GO:0005524
Lele06g1906 618 SUPERFAMILY ABC transporter transmembrane region 109 329 IPR036640 GO:0005524|GO:0016020
Lele06g1906 618 SMART AAA_5 420 595 IPR003593 -
Lele06g1906 618 Gene3D ABC transporter type 1, transmembrane domain 145 335 IPR036640 GO:0005524|GO:0016020
Lele06g1906 618 MobiDBLite consensus disorder prediction 77 97 - -
Lele06g1906 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 384 613 IPR027417 -
Lele06g1906 618 Coils Coil 617 618 - -
Lele06g1906 618 FunFam ABC transporter B family member 28 386 615 - -
Lele06g1906 618 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 393 612 IPR003439 GO:0005524
Lele06g1906 618 Gene3D - 389 614 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1906 Lele-ChrLele06 13670806 13677353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1906 390 618 Calmodulin-binding Proteins AT2G36910 48.810 7.10e-61 218