LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele06g1880	ATGACTGAAATACCGCAGCCCCTTGTCTTCACCATAAGGCTTCTTCATGGACTCTCAAAGAAATGCCCTCGAATTGCTTCTGTTGTTTTCTCCCACAAGAAGATCAACACCAGCAAGTCAAAACAAGGCATGTTTAATTTAAGTGACAGAAAAAATAGGGATTATCCATGGGAAATGTACACGTTGAAGGAGTTGCTTCGGGCAACGAACAATTTCCATCAAGATAACAAGATCGGAGAGGGTGGCTTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCATCGAGATTGCAGTGAAGCGACTGAAGACGATGACTGCCAAGGCAGAGATGGAATTTGCAGTTGAAGTAGAAGTACTTGGAAGGGTGAGGCATAAGAACCTGTTAGGTCTAAGAGGATTCTATGCAGGAGGAGAAGAAAGACTTATTGTTTATGATTACATGCCCAATCATAGCTTGCTCACTCATCTTCATGGCCAGCTCGCTCCAAGTTGTCAGCTCGATTGGCCTAAAAGAATAAGCATCGCCATTGGAGCAGCTGAAGGGTTAGCGTATCTCCACCATGAAGCGAATCCTCACATTATACACAGAGACATAAAGGCGAGTAACGTTCTTTTGGACAGAGAGTTTCAAGCGAAAGTGGCAGATTTTGGTTTTGCAAAGCTAATACCAGAAGGAGTCAGCCATCTAACCACAAGGGTGAAAGGAACATTGGGATACCTGGCTCCAGAATACGCCATGTGGGGGAAGGTTTCAGAGAGCTGTGATGTTTATAGCTTTGGGATTTTACTTTTGGAGATCGTAAGCGCGAAGAAACCGATAGAGAAACTACCAGGAGGAGTGAAAAGGGACATAGTTCAGTGGGTGACACCTTATGTTCAAAAGGGTATCTTCAATCATATTGCAGATCCAAAGTTGAAGGGCAAGTTTGACATGGAGCAGGTGAAATCCGTCGTGATGTTGGCCATGAAGTGCACTGATAGTAGCCCGGAGAAGCGGCCGAGTATGGCGGAGGTGGTCGATTGGCTCAAGGGAGGCGGTGGGCGGAGGAGAAAAGAGATTCCGGCATCTCTGAGGGATGATGACCACGACAAGAATGATAAGGACTATGAAGACATGGTGGGAAAGAGGCAATCATCCATGTTGAGAATACCAAGCGATAGACATAAAATAAGATGA	1179	0.4529	MTEIPQPLVFTIRLLHGLSKKCPRIASVVFSHKKINTSKSKQGMFNLSDRKNRDYPWEMYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGIEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLAPSCQLDWPKRISIAIGAAEGLAYLHHEANPHIIHRDIKASNVLLDREFQAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVSAKKPIEKLPGGVKRDIVQWVTPYVQKGIFNHIADPKLKGKFDMEQVKSVVMLAMKCTDSSPEKRPSMAEVVDWLKGGGGRRRKEIPASLRDDDHDKNDKDYEDMVGKRQSSMLRIPSDRHKIR	392

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele06g1880	392	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	194	206	IPR008271	GO:0004672\|GO:0006468
	Lele06g1880	392	FunFam	PTI1-like tyrosine-protein kinase At3g15890	45	147	-	-
	Lele06g1880	392	ProSitePatterns	Protein kinases ATP-binding region signature.	78	100	IPR017441	GO:0005524
	Lele06g1880	392	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	31	345	-	-
	Lele06g1880	392	SUPERFAMILY	Protein kinase-like (PK-like)	53	354	IPR011009	-
	Lele06g1880	392	FunFam	PTI1-like tyrosine-protein kinase At3g15890	148	358	-	-
	Lele06g1880	392	SMART	serkin_6	72	343	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele06g1880	392	Gene3D	Phosphorylase Kinase; domain 1	30	147	-	-
	Lele06g1880	392	ProSiteProfiles	Protein kinase domain profile.	72	343	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele06g1880	392	Pfam	Protein kinase domain	72	341	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele06g1880	392	Gene3D	Transferase(Phosphotransferase) domain 1	148	352	-	-
	Lele06g1880	392	MobiDBLite	consensus disorder prediction	347	392	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele06g1880	Lele-ChrLele06	13286901	13289501	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele06g1880	53	345	Receptor kinase-like Gene Family	AT5G45780	45.151	9.81e-83	261

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-XV	Lele06g1880		Pkinase	3.2e-45	CL0016