Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1879 ATGTTTCCTTTACAACGAGGCAATGAGTTGTTGATTCAGTTCTCCAGCAACCCCGATTCTCAGCTCCAACAAAGCAACAAGATCTCAGAAGATCCAATTTTGGATGATTATGCTTCTCCTACTGTCAACAATTCAGATAAAAAAATCGTTAACTCCTCATCAGGGAACATACTTTTTCAAGCTAGCAATCATACTAATCCTAACGAAAGCAAGAAGAAGAAGATGATTCACAGGGAGATTGAGAGACTAAGAAGGCAGGAAATGGCTTCCCTTTATGCTTCCCTCAGATCCCTTCTTCCTCTTGAGTACATCAAGGGAAAACGATCGGTATCAGATCACATGAATGAGGCAGTGGCTTACATAAAGCACTTACAGAAGAATATTGAAGAACTTGGCGCTAAGAAAGATGAACTGAAGAAACCCTCATCAGATAATCCTTCTAACTTGGAAACCCTTGATGATGAGGGCCAACAGAAAAAATCGATAAGATTTACTGTTCATGAGAAAAATGGTGGTGTGGGAATCGAAATGATCAGTAACTTGAAAGATGAAAGGTTCTTACTCTCAAAGTTTCTGGAATTGCTGCTTGAAGAAGGACTTGAAGTTGTTACTTGTCTCTCTACCCAAGTCAATGGAAGAATACTTCATAGTGTTCACTGCGAGGTTAACAATTCCAATAGCGTAGATCTAGCTGAGCTGAGAAGGAAAATTGCAATTTTCATTTCTTAG 729 0.3923 MFPLQRGNELLIQFSSNPDSQLQQSNKISEDPILDDYASPTVNNSDKKIVNSSSGNILFQASNHTNPNESKKKKMIHREIERLRRQEMASLYASLRSLLPLEYIKGKRSVSDHMNEAVAYIKHLQKNIEELGAKKDELKKPSSDNPSNLETLDDEGQQKKSIRFTVHEKNGGVGIEMISNLKDERFLLSKFLELLLEEGLEVVTCLSTQVNGRILHSVHCEVNNSNSVDLAELRRKIAIFIS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1879 242 Coils Coil 114 141 - -
Lele06g1879 242 Gene3D - 41 154 IPR036638 GO:0046983
Lele06g1879 242 SMART finulus 78 130 IPR011598 GO:0046983
Lele06g1879 242 CDD bHLH_AtORG2_like 73 145 - -
Lele06g1879 242 Pfam Helix-loop-helix DNA-binding domain 73 125 IPR011598 GO:0046983
Lele06g1879 242 MobiDBLite consensus disorder prediction 132 156 - -
Lele06g1879 242 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 144 IPR036638 GO:0046983
Lele06g1879 242 FunFam Transcription factor bHLH126 64 151 - -
Lele06g1879 242 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 124 IPR011598 GO:0046983
Lele06g1879 242 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 234 IPR015660 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1879 Lele-ChrLele06 13277420 13278331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g1879 77 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 43.114 1.49e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele06g1879 HLH 1.3e-10 No_clan